Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20brevipalpis_20[genbank_20GCA_5F000671755.1_202014-05-08] 1,651 sequences; 315,360,362 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq73 120 2e-22 >seq73 Length=1043201 Score = 120 bits (132), Expect = 2e-22 Identities = 187/265 (71%), Gaps = 2/265 (1%) Strand=Plus/Minus Query 3875 GGTGTACATTTTATGATGGCTGACGGTGGGTTCTCGGTTGAGGGTCAAGAAAATATGCAA 3934 || || ||| || | ||||| || ||||| ||||| ||||| || || || ||||| || Sbjct 12661 GGCGTTCATATTGTAATGGCAGATGGTGGATTCTCAGTTGAAGGACAGGAGAATATTCAG 12602 Query 3935 GAAATGTTATCGAAAAAGATGTATTTGTGTCAATGTTTAATTGCATTGATGATCATACGA 3994 ||||| || || ||| || | || |||| || |||||| | || || | || | || Sbjct 12601 GAAATTTTGTCAAAACAGCTTTACCTGTGCCAGTGTTTATTGGCTTTAAAAATTCTGAGA 12542 Query 3995 ATTGGTGGTCATTGTGTTATCAAATTTTTCGATATATTTACACCTTTTAGTGCTGGTTTA 4054 || |||| |||| ||||||||| ||||| ||||| ||||||||| ||| | Sbjct 12541 CCGAAAGGACATTTTGTTTGCAAATTTTTTGATATTTTTACTGCTTTTAGTGTCGGTCTT 12482 Query 4055 GTGTATTTGATGTATAGATCTTTTAATCGTATTTGTATTTTCAAACCACA-TTCATCGCG 4113 | ||||||||||| | | ||| | || | ||| |||||||| | || | || Sbjct 12481 ATATATTTGATGTACAACTGTTTCGAGGAAATATCAATTATCAAACCAAACAGCAGC-CG 12423 Query 4114 ACCGGCCAATTCTGAAAGATATTTG 4138 || |||||||| |||||||||||| Sbjct 12422 CCCTGCCAATTCGGAAAGATATTTG 12398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276548035309453