Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20brevipalpis_20[genbank_20GCA_5F000671755.1_202014-05-08] 1,651 sequences; 315,360,362 total letters Query= NC_006552.1 Length=65195 Score E Sequences producing significant alignments: (Bits) Value seq439 107 8e-19 >seq439 Length=76666 Score = 107 bits (118), Expect = 8e-19 Identities = 171/243 (70%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 21920 AAAACCGGCCAGATGAACAAGACCGAGCAGGCCTAC-GACCAGCACCTGGCCTACCGAAA 21978 ||||| || | ||||||||||||||| |||| ||| | | || || ||| | ||| Sbjct 60427 AAAACAGGGCTGATGAACAAGACCGAAGAGGCGTACAGGCGAG-ACTTGGAGGTCAAAAA 60369 Query 21979 GCTCGCAGGGGAGGTCGCCTGGTATCGGTTCGAGGGCATTAAGCTGCGCCTGGCCGATAA 22038 |||||| | | | ||||| ||| || || | |||||||| |||| ||| || Sbjct 60368 ATCAGCAGGGTTGCTTGTCTGGTTCAAGTTTGAAGGAGTCAAGCTGCGTCTGGGCGACAA 60309 Query 22039 CACCTTCTACACCCCTGACTTCGCTGTGATGCTCACCGGCGGTGAGTTGGAACTGCACGA 22098 ||| |||||||| ||||| || | |||||| || || || ||||| ||||||| Sbjct 60308 CACATTCTACACGCCTGATTTTGTCGTGATGAACAGCGATGGAACTATGGAAATGCACGA 60249 Query 22099 GGTGAAGGGGTACTGGACCGACGATGCCCGGGTGAAGACCAAGGTCGCCGCCGACCAGTA 22158 | || |||| ||||||||| || ||| |||| || | ||| ||||| || ||| ||| Sbjct 60248 AATTAAAGGGTTCTGGACCGATGACGCCAGGGTCAAAATCAAAGTCGCTGCTGACATGTA 60189 Query 22159 TCC 22161 || Sbjct 60188 CCC 60186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 208495004670316