Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20brevipalpis_20[genbank_20GCA_5F000671755.1_202014-05-08] 1,651 sequences; 315,360,362 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq148 549 2e-151 seq240 425 7e-114 seq184 304 2e-77 seq89 217 2e-51 seq127 82.4 1e-10 >seq148 Length=545759 Score = 549 bits (608), Expect = 2e-151 Identities = 1508/2283 (66%), Gaps = 58/2283 (3%) Strand=Plus/Minus Query 61986 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 62045 || || | ||| ||||| |||||| |||||| || || || | |||||| ||||| || Sbjct 221666 TTATCGACTGTAAATTGTATGGGATTGGATGCTGGCTTTGTCCTTAGATAATACATACCA 221607 Query 62046 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGA 62105 ||||| | ||| ||||||| ||||||||||| | | ||| |||||| | Sbjct 221606 GTTTTCAAACCCGCTTTCCATCCATAAAAATGCATGGAGGACAATTTACCATAACTAGCG 221547 Query 62106 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 62165 || || ||||| | || | ||||| |||||||||||||| || || | || ||||| Sbjct 221546 TCAGCCATATGTACGTTAAACGATTGGCTTTGATCGATGAAAGCGCCGCGATCGACAGCC 221487 Query 62166 ATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCT 62225 || | || | | ||| ||| ||||||||||| |||||||| | | || || ||| Sbjct 221486 ATGTCAATTGTTGACTTCAGTGAAATTTCCCAAACTGTTTTATATAATTCTTTTATGTCT 221427 Query 62226 TCTGGAAGG--TTTG-TATTCTGAATGGATCCACCATCTGCC-ATAATCCTATTCTTGAT 62281 | || | | || | | || || || || |||| || |||| ||||| || || || Sbjct 221426 TTAGGTATGGCTTCGATTTTTTGTATTGAACCACGATGTGCCCATAATAAGTTT-TTCAT 221368 Query 62282 CTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT-T 62340 || ||||||| | || ||| || ||| || |||| | ||| |||| || || | Sbjct 221367 GTCGCCATTCCAAAGATTCAACTCCGTCAAATCTTTAAGCAAATGATGATTGACCACAAT 221308 Query 62341 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACT 62400 ||||| | ||||| ||||| | || || |||| || |||||||| || | || | Sbjct 221307 GAAAT-CACCAGATAATACACGTCGTGTATAAACGTTTGAAGTATACGGCTCAAAGGATT 221249 Query 62401 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 62460 | || || || | |||||||||||| ||||| || ||||| || |||||||| ||| || Sbjct 221248 CGTTGTTGCCAAGAATTTGAGCAGTAGATGCCGTAGGCATTGGGGCCACCAACAAAGAAT 221189 Query 62461 TTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACG 62520 | | | ||| | || |||| | |||||| |||| |||||| ||||||||| | | Sbjct 221188 TACGCACACCATGATTTTTGATGTCATCTTTAAGAGCCGCCCAATCCCAAAGATCAGTAG 221129 Query 62521 GTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTT----ACTGGCGTACGATCCTACA 62576 | ||| |||||||| || ||||| ||| || || Sbjct 221128 GCTTCTTGTTCCACATGTCATATTGAAGAATACCTTTGCTAACTGGGCTAC----CTTCA 221073 Query 62577 TATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAA 62636 ||||| ||||| || || | | | || | ||||| || |||||||| ||||||||| Sbjct 221072 TATGTTTCGTACGGGCCATATTGTTTGGCCAACTCACAGCTAGCCTCTAAAGCACCGTAA 221013 Query 62637 TAAATGGTTTCGAAGATCTTCTTATTTA---GATCTTGTGCTTCCAGGCTATCAAATGGA 62693 || ||||||||||| || | | ||||| || | ||| ||| ||| ||||| Sbjct 221012 TATATGGTTTCGAAAATTTGTTGATTTAATAGAACAGCATTTTC---GCTTTCATATGGA 220956 Query 62694 TAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGT 62753 ||| | | ||| || ||||| || |||||||| || || ||||| || || | || Sbjct 220955 TAACGCATTAAAATTAATGCGTCAGCAAATCCTTGGACGCCTATACCAATTGGACGGTGA 220896 Query 62754 CTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTG 62813 | | |||||| ||| ||||| || | |||||||| ||||| || || ||||| ||| Sbjct 220895 CGCAAATTAGATCTTTTGGCTTCCGGCAACGGATAATAGTTAATGTCAATTATTTTGTTG 220836 Query 62814 AGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCATC- 62872 || || || || | || || || |||| |||| |||||| || ||| Sbjct 220835 AGGTTCCTTGTTATAAGCTTCGTAACTTCTTTCAATTTGTTAAAATCGTATTTTTTATCC 220776 Query 62873 -TATT-ACAAACATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCA 62930 || | || |||||||| || |||| || ||||| || ||||| || | |||| ||| Sbjct 220775 GTAGTCACGAACATGTTTAATGCAATCGAGGCCAGGTTGCAAACTGCAATTTCATCAGCC 220716 Query 62931 TCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGT 62990 | |||| | || || || || | |||||| | || ||||| || | || ||| Sbjct 220715 GAAGTGTATTCGACAATTTCTGTACACAAGTTACTAGATTTTATAGTACCAATGTTCTGT 220656 Query 62991 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATC 63050 ||||||||||| || || ||||| || ||||| || | ||||| ||||| || Sbjct 220655 TGATTACTCTTGCGATTGCAAGCATCTTTGTAAAGCATATAAGGAGTTCCAGTCTCCGCT 220596 Query 63051 TGAGA-TTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATA-GATTTGTATCTCC 63108 ||||| || ||| | || ||| | | | ||||| || ||| | |||| | | || Sbjct 220595 TGAGACTTGCATATT-GCAAACCACAAGGCACGAGCTTTAATTGTTTGATTCGCTTTGCC 220537 Query 63109 TTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATC 63168 | | ||||||||| | || ||| || || || ||||||||||| | ||| | Sbjct 220536 CT-CACTTTCGTATTTCATGTATAATTTGTCAAATTCATCTCCCCAAACTTCACACAAAC 220478 Query 63169 CAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAA 63228 ||||||||| || |||||||| | ||||| || || ||||||| |||| |||||| | Sbjct 220477 CAGGACATTTATGAGGACACATTAGAGACCAATCGCCATCATCCTCTACTCTTTTCATGA 220418 Query 63229 AGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTG 63288 | ||||| || ||||| || || ||| | ||| | | || || || ||| | || Sbjct 220417 ACAGATCCGGTATCCATAGGGCATAAAACAAATCGCGTGCTCGATCTTTCTCCTCACCAA 220358 Query 63289 TATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGG 63348 ||||||||| | ||| || || | | || ||| | ||||| || |||||||| || | Sbjct 220357 AATTCTTTTTCAAATCTAGAAATTCGAAAACATCTGCGTGCCAAGGCTCCAAGTACATAG 220298 Query 63349 CCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAA 63408 | | | | || || ||||| || |||||||||| || | || | ||| | | Sbjct 220297 CAAAAGCACCTGGACGTTTTCCACCACCCTGATCTACATAACGGGCAACACTGTTAAACA 220238 Query 63409 CTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGAT----ATAGCTT 63464 | |||||| |||| || ||| | |||| | || || || | || | ||| Sbjct 220237 GACGCAACATAGGAACAAGACCATCCGATACATCACCAGTGCCTGCTATCTTCGTCCCTT 220178 Query 63465 CCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 63524 || ||||| | || | | | || |||||| ||||| || || || ||| Sbjct 220177 TTGCTCGCACGCA-ATGAACATT---TAAACCTATCCCCCCGGCTGACTTGGAAATTTTA 220122 Query 63525 GCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATC---GATCATGTTAAGT 63581 || ||| | | || | | | ||||| | | | || || |||| |||| Sbjct 220121 GCACATTGGTCTACAGCCTTCAAAATACCTTTCAAGGAGTCTTCAGGGATC--GTTAGCA 220064 Query 63582 AGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 63641 ||||| || | |||| ||| |||| ||||| | ||| |||||| || || | ||| Sbjct 220063 AGAAACAAGAT-GACAATTGTGGACGTATAGTTGCAGCACCAAATAAAGTTGGCGTAGCA 220005 Query 63642 TGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCA 63700 || ||||| | || || | ||||| || || |||||||| | || || || || Sbjct 220004 TGAGTAAAATAGCGCTCCGACATAAGATTATATGTTTCAATAGCAGCCTCAATGTCATCA 219945 Query 63701 TTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT 63760 | ||||| || | ||||||||||||| ||| || || || | || | || || Sbjct 219944 CCG-TGAATACCAATGGCGACACGCATTAGCATATGTTGCGGCCGCTCCGCAATTTTACC 219886 Query 63761 GTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAA 63820 | || || ||||| || ||| ||||| |||||||||||||||| | ||||| || Sbjct 219885 ATCAATCTTTAACAAATAAGATCGTTCCAGAGTTTTAAAACCAAAAAAATTGTAATTGAA 219826 Query 63821 GTCTCGTTCGTAAATAATAACCGAGTTGA---GTTTATCCTTATATTTGTTAACTATATC 63877 ||| || || || ||||| |||| || | | | | | || | | | |||| || Sbjct 219825 GTCCCGATCATATATAATGGCCGAATTTAATCGATCAGCATTCTCTCTTATAAC-ATTGT 219767 Query 63878 CATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATT-TTTAGGATTAACATAGTTGA 63936 |||| || | ||| ||||| || || | |||| | || | ||| || Sbjct 219766 AATGG-AATTC-TGATATAATGGGCGACGGGGAATCATTATCTACG-TTATGAT------ 219716 Query 63937 ATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGG 63996 || ||| ||| |||||| || | ||| |||||||| || |||| ||||||||| | Sbjct 219715 GTAGATCACTCATAACTTCAGAGAACACTTTCTTTGTTTCTTTATGTAAATTTGATACCG 219656 Query 63997 CTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTT 64056 | |||| ||||||| ||| |||||||||||||| | | || ||| || |||| Sbjct 219655 CAATTCGAGCGGCTAAAATAGCATAATCCGGATGATCGATGGTCTTGCAGGCGGCAATTT 219596 Query 64057 CGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCT 64116 |||| |||||| | || | |||| ||| || || || || | ||| | || ||||| Sbjct 219595 CGGCCGCCAGATTATCAAGTTCTTGCGTAGTCACACCGGCGTACAATCCGTTAACAACCT 219536 Query 64117 TCATAGCTATTTTAATAGGATCTATATGATCCGTGTTTAAGCCATAACATAATTTTCTAA 64176 ||| || || ||||||| |||| | | | |||||||| | ||| || Sbjct 219535 TCAAAGTAATGGCGGCTGGATCTACGAAATCCATATGAAGACCATAACACAGCTTTTGAA 219476 Query 64177 TACGAGACGTGATTTTATCAAACATGACATTTTCCTTGTATCCATTTCGTTTAATGACAA 64236 | | ||| ||||||||||||| ||| ||||||| ||||| ||||| | || | Sbjct 219475 TTCTTGACATGATTTTATCAAAATGGACCATTTCCTTACGGCCATTGCGTTTCACCACGA 219416 Query 64237 ACA 64239 ||| Sbjct 219415 ACA 219413 >seq240 Length=301270 Score = 425 bits (470), Expect = 7e-114 Identities = 1473/2262 (65%), Gaps = 66/2262 (3%) Strand=Plus/Minus Query 62022 TTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATA 62081 || || | ||| || ||||| || ||||| | ||| |||| || |||||||| ||| Sbjct 294584 TTTGTTCTTAGGTAATACATACCAGTTTTCAAACCTGCTTTCCACCCATAAAAATGAATA 294525 Query 62082 CTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCG 62141 | | ||| |||||| || || |||| || ||||| | ||||||||||| ||| Sbjct 294524 GAAGACAATTTACCATAACTTGGTTCAGCTACGTGTATATTAAATGATTGACTTTGGTCG 294465 Query 62142 ATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATA 62201 |||||||| || | || ||||||| || ||| | | ||| || ||||||||||| Sbjct 294464 ATGAAGGCACCGCGATCGACAGCCATGTTAATGGTTGACTTCACTGAAATTTCCCAAACT 294405 Query 62202 GTTTTATA-AACTCGCTTAATATCTTCTGGAA--GGTTTG-TATTCTGAATGGATCCACC 62257 |||||||| || || |||| | | ||| || | | |||| | || || || || |||| Sbjct 294404 GTTTTATATAATTCTCTTA-TGTGTTCAGGTATAGCTTTGATTTTTTGTATTGAACCACG 294346 Query 62258 ATCTGCCA-TAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTC 62316 || || || |||| || || || || |||||||| | || ||| || ||| || Sbjct 294345 ATTTGACAGTAATAAGTTT-TTCATTTCGTCATTCCAAAGATTCAACTCCGTCAAATCTT 294287 Query 62317 TAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGAC-AATACTCTCCGAGTGTAAATA 62375 ||| | ||| |||| || || || || ||||| || | | | ||||||| Sbjct 294286 GAAGCAAATGATGATTGACCACCATGAACTCACCAGATGAAGTATGTTCT-GTGTAAACG 294228 Query 62376 TTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTC 62435 || || || || || | |||| || ||||||| ||||||||||| ||||| | Sbjct 294227 TTTGAAGTGTATGGCTCAAAAGACTGGTTGTTTCCCAGAATTTGAGCAGCAGATGCTGCA 294168 Query 62436 GGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGA 62495 ||||| | |||||||| ||| || | | ||| | || | || | ||||| ||| Sbjct 294167 GGCATTGCAGCCACCAACAAAGAGTTACGCACACCATGAATTTTTATGTGTTCTTTAAGA 294108 Query 62496 GGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCG 62555 | |||| | ||||||||| | || ||| ||||| || Sbjct 294107 GCCGCCCAGTCCCAAAGATCAGTAGGCGTCTTGTTCCACATGTCATATTGAAGAATGCCT 294048 Query 62556 TT----ACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTC 62611 || ||||| ||| || ||||||| ||||| || || | | | || | || Sbjct 294047 TTGCTAACTGGGCTAC----CTTCATATGTTTCGTACGGGCCATATTGTTTGGCCAACTC 293992 Query 62612 ACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTA---GATC 62668 ||| || |||||||| ||||||||||| || |||||||| || | | ||||| || | Sbjct 293991 ACAGCTAGCCTCTAACGCACCGTAATATATAGTTTCGAAAATTTGTTGATTTAATAGAAC 293932 Query 62669 TTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTG 62728 ||| ||| || |||||||| | | ||| |||||||| || |||||||| Sbjct 293931 AGCATTTTC---GCTCTCGTATGGATAACGCATTAAAATTAACGCGTCAGCAAATCCTTG 293875 Query 62729 AACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATA 62788 ||||| ||| | || || | || | | ||||||| ||| | ||| || | ||||| Sbjct 293874 GACACCTATAGCAATCGGACGGTGACGCATATTAGATTTTTTGGTTTCCGGCAGCGGATA 293815 Query 62789 ATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTA-CTTTGACCACATCCTTCA 62847 || ||||| || || ||||| ||||| || | || | ||||| || || |||| Sbjct 293814 GTAGTTAATGTCAATTATTTTGTTGAGGTTCTTTGTTATAAGCTTTGTA-ACTTCTTTCA 293756 Query 62848 GTTTGAGAAAATCAAATCGCCCATC--TATT-ACAAACATGTTCAAGGCAACAGATGCCA 62904 |||| |||||| || | || || | || |||||||| | |||| || |||| Sbjct 293755 ATTTGTAAAAATCGTATTGTTTCTCCGTAGTCACGAACATGTTTAGCGCAATTGAGGCCA 293696 Query 62905 GATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTAC 62964 | || ||||| || | |||| | | | ||||| | || || || | || |||| Sbjct 293695 GGTTGCAAACTGCAATTTCATCAACTGATGTATATTCGACAATTTCTGTACTAAAGTTAC 293636 Query 62965 TACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAA 63024 |||| || || || || | || |||||| || || || || ||||| || |||| Sbjct 293635 TACATTTTATTGTACCAATGTTCCCTTGATTGCTTTTGCGATTGCAAGCATCTTTGTAAA 293576 Query 63025 GAATGAATGGAGTACCAGTTTCAATCTGAG-ATTCTATAATCGCTTTCCAGACGACTCGA 63083 | || | |||| ||||| || |||| | | |||| | || ||| | | | ||| Sbjct 293575 GCATATAAGGAGCTCCAGTCTCTTCTTGAGCACTGTATATT-GCGAACCACAAGGCACGA 293517 Query 63084 GCCTTTATTATAGATTTGTATCTCCTT----TCTCTTTCGTATAGTGTATACAATCGTTC 63139 || || ||| | ||| | || | || || ||||||||| | || ||| || Sbjct 293516 GCTTTAATTGT---TTTAT-TCGCTTTGCCCTCACTTTCGTATTTCATGTATAATTTGTC 293461 Query 63140 GAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCA 63199 || || | ||||||||| | ||| ||||| |||| || |||||||| | ||||| Sbjct 293460 AAATTCATGTCCCCAAACTTCACACAAACCAGGGCATTTATGAGGACACATTAGAGACCA 293401 Query 63200 CTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA-TA 63258 || || ||| ||| |||| |||||| || ||||| || ||||| || || |||| || Sbjct 293400 ATCGCCATCAGCCTCTACTCTTTTCATGAAAAGATCCGGTATCCATAGGGC-ATAATGTA 293342 Query 63259 GATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAA 63318 ||| | | | | |||||| || || |||| | |||| | || || || | | || Sbjct 293341 AATCACGTGGACGGTTTTCCTCCTTACCAGTATCCCTTTTCAAATTTAGAAATTCGAAAA 293282 Query 63319 TATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCT 63378 |||| | |||||| || ||||||||||| || | | | || | ||||| | || | | Sbjct 293281 TATCTGCATGCCAAGGCTCCAAGTATATAGCAAGAGCACCTTGACGTTTTCTCCCGTCTT 293222 Query 63379 GATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATA 63438 ||| || || | ||| || || | || |||||||| || | || ||| | ||| Sbjct 293221 GATGTACATAACAGGCGAGATTGTTGAACACGCTCAACATAGGGACAAGACCACTCGATG 293162 Query 63439 TACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGACC 63496 ||||| ||||| || || | | || | || || || | | ||| |||| | Sbjct 293161 CGCCATTAGTACCTGATATCTTTGTACCTTTTGCTCGTATGCAGTGGATATT--TAGAGC 293104 Query 63497 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTC 63556 || || |||| | ||||| | || ||| | | || | | | | ||||| || Sbjct 293103 TACCCCACCTGTCGACTTAGAAACGGCAGCACATTGATATACGGCCTTAAAAATACCATC 293044 Query 63557 TATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 63616 ||| ||| || ||| | |||| ||| | |||| ||| ||||| | | | Sbjct 293043 AATGGAATCTTCTGGCATCGTTAGTAAGAAATATGATGACAATTGCGGACGAACAATAGC 292984 Query 63617 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGT 63676 ||| |||||| || | ||||| || |||| | | ||||| | ||||| || || Sbjct 292983 AGCAGCAAATAAAGTTGACGAAGCATGACTAAAATAATGCTCAGACATAAGATTATATGT 292924 Query 63677 CTCAATAGCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGACACGCATTAACATGT 63735 |||||||| | ||| || || || | ||||| || | ||||||||||||| ||| | Sbjct 292923 TTCAATAGCAGCGTCAATCTCATCACCG-TGAATACCAATGGCGACACGCATTAGCATAT 292865 Query 63736 GCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTT 63795 | || || | || || || || || |||||| |||| || |||| |||| ||||| Sbjct 292864 GTTGTGGCCGCTCCACAATTTTACCATTAATTTTCCACAAATAAGATTCCTCCAGAGTTT 292805 Query 63796 TAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTAT 63855 ||||||||||| | |||| ||||| || |||| ||||| |||| || | | || Sbjct 292804 TAAAACCAAAAAAAGTGTAATTGAAGTCCCGATCGTGTATAATGGCCGAATTTAATCGAT 292745 Query 63856 CCTTATATTTGTTAACTATATCCATGGTGAT--ACTT--GAAATAATCGGAGAATGTTTC 63911 | | ||||| |||| ||| || || | || || | || || || | Sbjct 292744 C---AGCATTGTTTTTTATA-ACATTGTAATGGAATTCCGATACTATGGGCGACGGGGAA 292689 Query 63912 CCAT-TTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttt 63970 |||| | || | ||| || || || ||| || || ||| | ||| || Sbjct 292688 CCATCATCTACG-TTATGAT------GTAGGTCACTCATAACCTCGGAAAACATTTTCTT 292636 Query 63971 tGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATG 64030 |||||| || |||| ||||||||| || |||| || |||| ||| |||||||||||||| Sbjct 292635 TGTTTCTTTATGTAAATTTGATACCGCAATTCGAGCAGCTAAAATAGCATAATCCGGATG 292576 Query 64031 TTGTGTAGTACAAGTGG-CTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTA 64089 | || || || | || | || ||| || || ||| | ||||||||| ||| |||| Sbjct 292575 ATCGGTGGT-CATGCGGACCGCGGTTTTAGCAGCTAGATTATCCAATTCTTGCGTAGTTA 292517 Query 64090 CTCCATTATATATTCC-TTGAATAACCTTCATAGCTATTTTAATAGGATCTATATGATCC 64148 | || | | || || | || |||| || || | ||||||| |||| Sbjct 292516 CACCGCGGTGCAAGCCGCTGGCT-ACTTTCAAAGTAATGGCGGTCGGATCTACGAAATCC 292458 Query 64149 GTGTTTAAGCCATAACATAATTTTCTAATACGAGACGTGATTTTATCAAACATGACATTT 64208 | || | |||||||| |||||| || | ||| ||||||||||| || ||| || Sbjct 292457 ATATTAAGACCATAACACAATTTTAGGATTCTAGAAGTGATTTTATCGAAATGGACCATT 292398 Query 64209 TCCTTGTATCCATTTCGTTTAATGACAAACATTTTTGTTGGT 64250 |||| |||| ||||| | || |||| || ||||| Sbjct 292397 TCCTCACGGCCATCGCGTTTCACCACGAACAACTTATTTGGT 292356 Score = 172 bits (190), Expect = 7e-38 Identities = 494/747 (66%), Gaps = 17/747 (2%) Strand=Plus/Plus Query 62721 AATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGA 62780 |||||||| ||||| ||| | || || | || | | ||||||| ||| | ||| || Sbjct 290648 AATCCTTGGACACCTATAGCAATCGGACGGTGACGCATATTAGATTTTTTGGTTTCCGGC 290707 Query 62781 ATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTA-CTTTGACCAC 62839 | ||||| || ||||| || || ||||| ||||| || | || | ||||| || Sbjct 290708 AGCGGATAGTAGTTAATGTCAATTATTTTGTTGAGGTTCTTTGTTATAAGCTTTGTA-AC 290766 Query 62840 ATCCTTCAGTTTGAGAAAATCAAATCGCCCATC--TATT-ACAAACATGTTCAAGGCAAC 62896 || |||| |||| |||||| || | || || | || |||||||| | |||| Sbjct 290767 TTCTTTCAATTTGTAAAAATCGTATTGTTTCTCCGTAGTCACGAACATGTTTAGCGCAAT 290826 Query 62897 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA 62956 || |||| || ||||| || | |||| | | | ||||| | || || || | Sbjct 290827 TGAGCCCAGGTTGCAAACTGCAATTTCATCAACTGATGTATATTCGACAATTTCTGTACT 290886 Query 62957 AAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 63016 || |||||||| || || || || | || |||||| || || || || ||||| Sbjct 290887 AAAGTTACTACATTTTATTGTACCAATGTTCCCTTGATTGCTTTTGCGATTGCAAGCATC 290946 Query 63017 CTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAG-ATTCTATAATCGCTTTCCAGA 63075 || ||||| || | |||| ||||| | |||| | | |||| | || ||| | Sbjct 290947 TTTGTAAAGCATATAAGGAGCTCCAGTCTTTTCTTGAGCACTGTATATT-GCGAACCACA 291005 Query 63076 CGACTCGAGCCTTTATTATAGATTTGTATCTCCTT----TCTCTTTCGTATAGTGTATAC 63131 | | ||||| || ||| | ||| | || | || || ||||||||| | || Sbjct 291006 AGGCACGAGCTTTAATTGT---TTTAT-TCGCTTTGCCCTCACTTTCGTATTTCATGTAT 291061 Query 63132 AATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATC 63191 ||| || || || ||||||||||| | ||| ||||| |||| || |||||||| Sbjct 291062 AATTTGTCAAATTCATCTCCCCAAACTTCACACAAACCAGGGCATTTATGAGGACACATT 291121 Query 63192 AACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCT 63251 | ||||| || || ||| ||| |||| |||||| || ||||| || ||||| || || Sbjct 291122 AGAGACCAATCGCCATCAGCCTCTACTCTTTTCATGAAAAGATCCGGTATCCATAGGGC- 291180 Query 63252 ATAA-ATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 63310 |||| || ||| | | | | |||||| || || |||| | |||| | || || || Sbjct 291181 ATAATGTAAATCACGTGCACGGTTTTCCTCCTTACCAGTATCCCTTTTCAAATTTAGAAA 291240 Query 63311 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 63370 | | |||||| | |||||| || ||||||||||| || | | | || | ||||| | Sbjct 291241 TTCGAAAATATCTGCATGCCAAGGCTCCAAGTATATAGCAAGAGCACCTTGACGTTTTCT 291300 Query 63371 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63430 || | |||| || || | ||| || || | || ||||| || |||| || ||| Sbjct 291301 CCCGTCTTGATGTACATAACAGGCGAGATTGTTGAACACGCTCAATATAGGAACAAGACC 291360 Query 63431 GTTTGATATACCATTGGTACCGGAGAT 63457 || ||| ||||| |||| || || Sbjct 291361 ATTCGATGCGCCATTATTACCTGATAT 291387 >seq184 Length=525875 Score = 304 bits (336), Expect = 2e-77 Identities = 504/722 (70%), Gaps = 7/722 (1%) Strand=Plus/Minus Query 33119 CCAATTCAGAAATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAAT 33178 ||||||| | | ||| | |||||| || ||||||| ||| ||| ||||| || Sbjct 28985 CCAATTCTAATAGCAAACGATCCGCTACATATTCTATGTATTGACACATACTTTCATTAT 28926 Query 33179 TCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCG 33238 |||| || || | || ||||| ||||| | || |||||||| | |||||| || | Sbjct 28925 TCATACCGATTAAATTGACTGGTAGAGCTTCTGTCAGAAATTCCTTTTCAATTTTAACGG 28866 Query 33239 CATCTGTTATAATAGATCTAAC--GGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAA 33296 |||| ||||| || || || | ||||| ||||| || | |||| |||||| Sbjct 28865 CATCGGTTATTATT--TCCAATATGCGTTCTTTGGTCGGTTTTTGTATCAAATATTTAAA 28808 Query 33297 CATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAA 33356 ||| ||| || || ||||| || | ||| || || | |||| ||| || ||||| Sbjct 28807 CATTAAAACCGCAAATTCGCAATGTAAACCTTCATCGCGTGATATTAATTCATTAGAAAA 28748 Query 33357 CGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGA 33416 || || || ||||||| ||||| || |||||||||||||| ||||| || |||| Sbjct 28747 TGTTAGACCCGGCATTATTCCACGTTTCTTAAGCCAAAATATCGAAGCAAAACTTCCACT 28688 Query 33417 AAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGCGCTGT 33475 |||||| || ||||| || |||||||| || || | | ||| ||| || || || Sbjct 28687 AAAGAATATACCTTCGACGGCAGCAAAAGCTATGACACGCTCACCAAAATTCGCCGAACG 28628 Query 33476 C-ATG-TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTAT 33533 | ||| |||||| | |||||| || || |||||||| || | |||||||| || || Sbjct 28627 CGATGATATCCAAGCTAAAGCCCATTCCGCTTTCTTTTTAACTAACGGCATCGTCTCAAT 28568 Query 33534 GGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACT 33593 ||||||||| ||||| | ||| || |||| | | | || || || | | ||| Sbjct 28567 GGCATTAAAAAGATAATCGCGTTCTTTCGGATCTGCGATAAATGTTTCAATAAGTAAACT 28508 Query 33594 ATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTC 33653 |||||||||||| || | ||||| ||||| || ||||| || || || || | ||| || Sbjct 28507 ATACATTTCCGAGTGTACATTTTCGATGGCTATTTGAAAACCATAAAAGCAACGAGCTTC 28448 Query 33654 GGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACT 33713 ||| | || |||||| | |||| |||||| | ||||| ||||| || || |||||| Sbjct 28447 GGTTACTTGAACTTCTTGAGAAAAACGTTCCACTAAATTCTCATTAACAATGCCGTCAGA 28388 Query 33714 GGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATT 33773 || |||||||| ||||| |||||| ||||||| ||| || |||| | | Sbjct 28387 TGCCGCAAAAAAAGCCAAAACATGTGAAATAAAATGACGTTCATCATCAGTTAATCGCTC 28328 Query 33774 CCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGC 33833 ||||| || | |||| || | ||| || |||||| | |||||||| || || || || Sbjct 28327 CCAATGATCAAGATCTGCAGCGAGATCAACCTCTTCCGCCGTCCAAAAAGAAGCTTCAGC 28268 Query 33834 CT 33835 || Sbjct 28267 CT 28266 >seq89 Length=807233 Score = 217 bits (240), Expect = 2e-51 Identities = 667/1019 (65%), Gaps = 28/1019 (3%) Strand=Plus/Plus Query 62022 TTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATA 62081 || || | ||| || ||||| || ||||| | ||| |||| || |||||||| ||| Sbjct 806226 TTTGTTCTTAGGTAATACATACCAGTTTTCAAACCTGCTTTCCACCCATAAAAATGAATA 806285 Query 62082 CTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCG 62141 | | ||| |||||| || || |||| || ||||| | ||||||||||| ||| Sbjct 806286 GAAGACAATTTACCATAACTTGGTTCAGCTACGTGTATATTAAATGATTGACTTTGGTCG 806345 Query 62142 ATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATA 62201 |||||||| || | || ||||||| || ||| | | ||| || ||||||||||| Sbjct 806346 ATGAAGGCACCGCGATCGACAGCCATGTTAATGGTTGACTTCACTGAAATTTCCCAAACT 806405 Query 62202 GTTTTATA-AACTCGCTTAATATCTTCTGG--AAGGTTTG-TATTCTGAATGGATCCACC 62257 |||||||| || || ||| || | ||| || || |||| | || || || || |||| Sbjct 806406 GTTTTATATAATTCTCTT-ATGTGTTCAGGTATAGCTTTGATTTTTTGTATTGAACCACG 806464 Query 62258 ATCTGCCA-TAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTC 62316 || || || |||| || || || || |||||||| | || ||| || ||| || Sbjct 806465 ATTTGACAGTAAT-AAGTTTTTCATTTCGTCATTCCAAAGATTCAACTCCGTCAAATCTT 806523 Query 62317 TAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGA-CAATACTCTCCGAGTGTAAATA 62375 ||| | ||| |||| || || || || ||||| || | | | ||||||| Sbjct 806524 GAAGCAAATGATGATTGACCACCATGAACTCACCAGATGAAGTATGTTC-TGTGTAAACG 806582 Query 62376 TTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTC 62435 || || || || || | |||| || ||||||| ||||||||||| ||||| | Sbjct 806583 TTTGAAGTGTATGGCTCAAAAGACTGGTTGTTTCCCAGAATTTGAGCAGCAGATGCTGCA 806642 Query 62436 GGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGA 62495 ||||| | |||||||| ||| || | | ||| | || | || | ||||| ||| Sbjct 806643 GGCATTGCAGCCACCAACAAAGAGTTACGCACACCATGAATTTTTATGTGTTCTTTAAGA 806702 Query 62496 GGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCG 62555 | |||| | ||||||||| | || ||| ||||| || Sbjct 806703 GCCGCCCAGTCCCAAAGATCAGTAGGCGTCTTGTTCCACATGTCATATTGAAGAATGCCT 806762 Query 62556 TT----ACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTC 62611 || ||||| || ||| ||||||| ||||| || || | | | || | || Sbjct 806763 TTGCTAACTGGGCTA----CCTTCATATGTTTCGTACGGGCCATATTGTTTGGCCAACTC 806818 Query 62612 ACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATT---TAGATC 62668 ||| || |||||||| ||||||||||| || |||||||| || | | ||| |||| | Sbjct 806819 ACAGCTAGCCTCTAACGCACCGTAATATATAGTTTCGAAAATTTGTTGATTTAATAGAAC 806878 Query 62669 TTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTG 62728 || | ||| || |||||||| | | ||| |||||||| || |||||||| Sbjct 806879 ---AGCATTTTCGCTCTCGTATGGATAACGCATTAAAATTAACGCGTCAGCAAATCCTTG 806935 Query 62729 AACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATA 62788 ||||| ||| | || || | || | | ||||||| ||| | ||| || | ||||| Sbjct 806936 GACACCTATAGCAATCGGACGGTGACGCATATTAGATTTTTTGGTTTCCGGCAGCGGATA 806995 Query 62789 ATAATTAATATCTATAATTTTATTGAGATT-TCTGACAATTACTTTGACCACATCCTTCA 62847 || ||||| || || ||||| ||||| || | || | ||||| || || |||| Sbjct 806996 GTAGTTAATGTCAATTATTTTGTTGAGGTTCTTTGTTATAAGCTTTG-TAACTTCTTTCA 807054 Query 62848 GTTTGAGAAAATCAAATCGCCCATC--TA-TTACAAACATGTTCAAGGCAACAGATGCCA 62904 |||| |||||| || | || || | || |||||||| | |||| || ||| Sbjct 807055 ATTTGTAAAAATCGTATTGTTTCTCCGTAGTCACGAACATGTTTAGCGCAATTGAGCCCA 807114 Query 62905 GATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTAC 62964 | || ||||| || | |||| | | | ||||| | || || || | || |||| Sbjct 807115 GGTTGCAAACTGCAATTTCATCAACTGATGTATATTCGACAATTTCTGTACTAAAGTTAC 807174 Query 62965 TACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAA 63023 |||| || || || || | || |||||| || || || || ||||| || ||| Sbjct 807175 TACATTTTATTGTACCAATGTTCCCTTGATTGCTTTTGCGATTGCAAGCATCTTTGTAA 807233 >seq127 Length=755962 Score = 82.4 bits (90), Expect = 1e-10 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 28461 AATACCCAATTCTTTGACCTGAGTTAGTGATCTCCAATCCATGTTAGCGCTTCCTAAATA 28520 ||| || || || ||||| ||||||| |||||||||||||| || || ||||| | ||| Sbjct 123935 AATCCCTAACTCCTTGACTTGAGTTAAAGATCTCCAATCCATATTCGCACTTCCAATATA 123876 Query 28521 AATATGTGTATTATCAGATATCCAAAATTTTGTATGAAGAACTCCTCC 28568 || ||| ||||||| ||||| |||||||| || | ||||| || Sbjct 123875 AAAATGCTTATTATCCACAATCCACAATTTTGTGTGTAATACTCCACC 123828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622934343927160