Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20brevipalpis_20[genbank_20GCA_5F000671755.1_202014-05-08] 1,651 sequences; 315,360,362 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq1 91.5 1e-13 seq53 84.2 2e-11 >seq1 Length=10097680 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 ||||||| ||||| || || || || ||||| ||||| || | || || | || Sbjct 7547600 AGTACCAAATGCAATGTCGATTCTTTCTGTATATTGTAATCAGACAAAGTCCGCCCATCT 7547541 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 |||||||||||||| || | || | || || || || ||| | |||||||||||| Sbjct 7547540 TCCAATTGTTTGCCAGCGAAGATCAAACGTTGCTGATCTGGAGGAATGCCCTCTTTGTCC 7547481 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 ||||| ||| || | | | ||||||| ||||| ||||| || || ||| Sbjct 7547480 TGAATTTTGGCCTTGACATTTTCAATAGTGTCGGAAGGCTCAACTTCCAAAGTAATTGTT 7547421 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938 || || || || ||||| || ||||| |||||||| Sbjct 7547420 TTGCCAGTAAGAGTTTTAACGAAAATTTGCATTTT 7547386 >seq53 Length=1361919 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | || |||| ||||| || || |||||||||| ||||| || | Sbjct 1240215 CCACCACGGAGACGCAACACCAAATGCAATGTAGATTCCTTTTGTACATTGTAATCCGAA 1240156 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | |||| || ||||||||||| ||| |||| | ||||| || || ||| Sbjct 1240155 AGAGTGCGGCCGTCTTCTAATTGTTTGCCAGCAAAAATCAAACGCTGCTGATCTGGAGGA 1240096 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGC-TTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887 | || ||||| || ||||| ||| || || | | | ||| || || || Sbjct 1240095 ATACCTTCTTTATCTTGAATTT-TTGCTTTAACGTTTTCGATAGTATCCGATGGTTCTAC 1240037 Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| || ||||||||||| |||| ||||| ||||| |||||||| Sbjct 1240036 TTCCAAAGTAATGGTTTTTCCAGTCAAAGTTTTAACAAAGATCTGCAT 1239989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405079848996490