Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20brevipalpis_20[genbank_20GCA_5F000671755.1_202014-05-08] 1,651 sequences; 315,360,362 total letters Query= NC_009232.2 Length=42572 Score E Sequences producing significant alignments: (Bits) Value seq813 82.4 2e-11 >seq813 Length=1717 Score = 82.4 bits (90), Expect = 2e-11 Identities = 138/199 (69%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 24819 TCATCCAGCGTGTCTTTAGCGACTATGTGGTAGAGGAACACCGGTCGCTCGTGGCCCGCC 24878 ||||| | || || ||||||| ||||||| || ||| ||||| ||| ||| || ||| Sbjct 415 TCATCGACGGTATCGGTAGCGACAATGTGGTGGATGAATACCGGGCGCGGGTGCCCTGCC 356 Query 24879 TGTTTCTGGCGTACTGGACCTATACGCTCAACAACCTGCAAATAGTGCTCCAGGTTCCAG 24938 ||| ||| || || | || ||||| | || |||| || ||||| || ||| Sbjct 355 TGTGCCTGCCGGGTAGGGCTGATGCGCTCGATAATCTGCTGGTACTGCTCAAGTCCCCAT 296 Query 24939 CCTTGCGAAATAAACGCCAGATGATGCCCGCCGTCCTGTAAATTCAAGCCATGCCCGGCT 24998 | ||||| | |||| ||| || ||||||||||| | |||| || |||||||| Sbjct 295 CAGTGCGAGAAAAACACCACC--ATTACCGCCGTCCTGAAGGTTCAGCCCGTGCCCGGCG 238 Query 24999 GACGCAGGGTGCACGCACA 25017 ||||||||| || ||| Sbjct 237 CTGGCAGGGTGCGCGAACA 219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136106131501908