Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20brevipalpis_20[genbank_20GCA_5F000671755.1_202014-05-08] 1,651 sequences; 315,360,362 total letters Query= NC_009237.1 Length=37446 Score E Sequences producing significant alignments: (Bits) Value seq552 379 5e-101 seq793 206 6e-49 seq550 111 4e-20 >seq552 Length=31981 Score = 379 bits (420), Expect = 5e-101 Identities = 583/830 (70%), Gaps = 4/830 (0%) Strand=Plus/Plus Query 9338 GGCTATTTCTCGAAGATCCTGATCGCGCCGGCGTACTGCACGCAGAACTCGGTTTCGGTC 9397 |||||| | | || || ||||| || |||| || || || |||| |||||| ||| Sbjct 18596 GGCTATGACGCCAAAATTCTGATTGCACCGGTCTATTGTACCCAGACCTCGGTCACGGCG 18655 Query 9398 GAGCTGGAGGCGATGGCCGTCCNNNNNNNNNNNNTCGCGTACATCGATGCGCCGATCGGC 9457 ||||||| ||| |||| | |||| || | ||||||||||| ||| Sbjct 18656 GAGCTGGCGGCCTATGCCGACAAGCTCAAGGCCATCGCCTATGTGGATGCGCCGATTGGC 18715 Query 9458 ACGACGCTCGCGCAGGCGCTGGCCGGGCGCGGCCCGGCGGGCACGATCAACTTCAACACG 9517 || || | |||||||| | ||||| ||||| ||||||| || |||||||||||||| Sbjct 18716 ACCACCTTTGCGCAGGCTATCGCCGGTCGCGGGTCGGCGGGTACCATCAACTTCAACACC 18775 Query 9518 TCCAGCGACCGCGTACGCCTCTGCTACCCGCACGTGAAGGTCTATGACATCGCGACCAAC 9577 || ||| || || ||||| ||||| ||||| | ||| ||||||| || | |||| Sbjct 18776 GCCTCCGAGCGAGTGCGCCTGTGCTATCCGCATGCCCTGGTGTATGACAAGGCCAGCAAC 18835 Query 9578 GCAGAGCGCCTGGAGCCGCTCTCGTCGCGCGCAGCGGGCCTTCGCGCACGCGTCGACCTG 9637 | | |||||||||||||||||| |||||| ||||| | || || |||||| || Sbjct 18836 AAAAATCGCCTGGAGCCGCTCTCGCAGCGCGCGGCGGGATTGCGGGCGAAAGTCGACTTG 18895 Query 9638 GACAAGGGCTACTGGTGGTCCAGCTCGAATCAGCAGCTCGTCGGCGTCACGGGCGTCGAA 9697 || || || | ||||||||| ||| |||||| || | | |||| | ||| | || Sbjct 18896 GAAAAAGGGTTCTGGTGGTCGTCCTCCAATCAGGAGATTGCCGGCATTGTCGGCATGGAG 18955 Query 9698 CGACCGCTGTCGGCGATGATCGACGATCCGCAATCGGACGTGAACATGCTCAACGAACAG 9757 || || ||||| |||| | ||| ||| | ||| || || ||| ||| || ||| | Sbjct 18956 CGGCCACTGTCAGCGAAGCTCGGGGATGCCCAAAGTGAAGTTAACCAGCTTAATGAAAAC 19015 Query 9758 GGCATCACGACCGTCTTCAGCTCGTACGGCTCGGGCCTGCGCCTGTGGGGCAACCGCACG 9817 |||||||| || || || | | | || | || |||||||| |||||||||||| || Sbjct 19016 GGCATCACCACGGTATTTAACGGTTTTGGTACCGGTCTGCGCCTATGGGGCAACCGCTCG 19075 Query 9818 GCGGCATGGCCGACTGTCACGCACATGCGGAACTTCGAGAACGTGCGTCGTACCGGCGAC 9877 ||||| | ||||| ||||| || || |||||| || |||||||| || || ||||| Sbjct 19076 GCGGCGTTTCCGACCGTCACCCATGTGAAGAACTTTGAAAACGTGCGGCGCACGGGCGAT 19135 Query 9878 GTCATCAACGAATCGCTGCGCTACTTCAGCCAGCAGTTCGTCGACGCGCCGATCGACCAG 9937 | || |||| ||||||| | ||||||| ||| | | ||| || ||| | ||| Sbjct 19136 ATGCTCGACGAGGCGCTGCGTTTTTTCAGCCTGCAATATCTGGACAGACCCATCAATCAG 19195 Query 9938 GGGCTGATCGATTCGCTGGTCGAGTCGGTGAACGGCTTCGGCCGCAAGCTAATCGGCGAC 9997 | |||| ||| | ||| ||||||||| || | || ||| |||||||| || ||||| Sbjct 19196 GCATTGATTGATGCCCTGTGCGAGTCGGTCAATGCCTACGGGCGCAAGCTGATAGGCGAT 19255 Query 9998 GGCGCGCTGCTCGGC-TTCAAGGCATGGTTCGATCCGGCCCGCAACCCGAAGGAGGAGCT 10056 || |||||||| ||| ||| || |||| || ||| || ||| || | || ||||| Sbjct 19256 GGTGCGCTGCTTGGCTTTCGCTGC-TGGTATGACAAGGCGCGTAACACGCAAGAAGAGCT 19314 Query 10057 GGCGGCCGGCCACCTGCTCATCAACTACAAGTACACGGTGCCGCCGCCGCTCGAACGTCT 10116 | | ||||| || ||||| | || ||| || || ||| |||||| | || || || Sbjct 19315 GTCTGCCGGACATCTGCTGCTGAATTACGCCTATACCCCGCCCCCGCCGATGGAGCGCCT 19374 Query 10117 GACGTACGAGACCGAGATCACCTCGGAG-TACTTGCTCACCCTGAAAGGA 10165 ||| || || ||||| || ||| | ||| | || ||| | |||||||||| Sbjct 19375 GACCTATGAAACCGAAATTACCGCCGAGTTTCTGGCT-AACCTGAAAGGA 19423 Score = 217 bits (240), Expect = 4e-52 Identities = 463/681 (68%), Gaps = 23/681 (3%) Strand=Plus/Plus Query 27686 CATCGAGCGGTGCCAGTTCGACCATTTCGCATCGCTGCACGACCTCGCGGACGTCCTGGT 27745 |||| ||||||| ||| || | || || || ||||| || || || | ||| | | Sbjct 3799 CATCCAGCGGTGGCAGGTCAATCACCTCACAGCGCTGTACCACTTCCCTGACCGCTAGCA 3858 Query 27746 TGCGTTCGGACAGCTTGACTTTCAGCTCCGGTTGGCCGATCAGGATGATGGACAGCAGTT 27805 ||| ||||| | |||| | ||| || ||||| || | ||||| |||||||||||||| Sbjct 3859 GGCGCTCGGATAACTTGTCGCCCAGTTCGGGTTGTCCCAGCAGGACGATGGACAGCAGTT 3918 Query 27806 TTTTAAACCCCATC-TCCAACTCGAAGAAACGCTTCAGGTGCTTGAGCGTCGCGATCGGC 27864 ||||||| ||||| |||| ||| ||||| || || |||||||| | |||| ||| ||| Sbjct 3919 TTTTAAA-GCCATCTTCCAGCTCAAAGAAGCGTTTGAGGTGCTTTAAGGTCGGGATGGGC 3977 Query 27865 AATGCATGCGCCTCATCGATCACGAGGCAATGCTGGTAGCCCGCCGC-GTGGCTTTCTTT 27923 | ||| || || || ||||| || ||| ||| |||| ||| | ||| ||||| Sbjct 3978 AGGCAATGGGCTTCTTCAATCACCAGTACATGGCTGTA-CCCGGCGCGGCTGCTCTCTTT 4036 Query 27924 CAGGGCCTTGTGCAACTGCGCGAAGCGGGCTTCCGGGCTGCTCTTGACCTTCTCCAGCGG 27983 | || ||| | ||| ||||||||||| || || |||| || ||||| || Sbjct 4037 TAATACCCGGTGTAGCTGACGAAAGCGGGCTTCGGGTGAGCGTTTGAGTTTTTCCAGTGG 4096 Query 27984 GGCAACGG--CGGCCATGATCGCTTCGGCGA---TGTGCGTCGCCTTCAGCGTCTTGCCT 28038 ||| | || || || || || ||||||| || ||| || ||||| |||||||| Sbjct 4097 GGCTAGGGTATGGACA--ATAGCCTCGGCGAGACTG-GCG--GCTTTCAGGGTCTTGCCC 4151 Query 28039 TTCTGGTCGTTGTCCTCCATCGCAAGCACGTACGGCTTGATGACGATGATCGGATGGCTC 28098 | |||||||| |||||||| || |||||||| || | || || | | ||| | | Sbjct 4152 TGATGGTCGTTATCCTCCATGGCCAGCACGTAGGGTTCAATAACCACCACCGGGGCGTTT 4211 Query 28099 TCGCGCATCACGCGGTCTTCGAGGTCGCGCATCAGTGTCGTCTTGCCGCCGCCCGATTCC 28158 || || | |||||| ||||| || |||| || | || || ||| |||||| Sbjct 4212 TCCCGATAAATGCGGTCAGTCAGGTCACGTCTCAGGGTGCTTTTACCCGAGCCGGATTCC 4271 Query 28159 GCAACGACGGCGAGGAGCCCACCGTGCTTTGCGGTCTGGAACATAGCCTCGCGCACATAG 28218 | | || |||| | || || | ||||||||| ||| |||||||||||||| Sbjct 4272 CCGATAACCGCGATAAAACCGCCATAGCGGGCGGTCTGGTACAACGCCTCGCGCACATAA 4331 Query 28219 CGGATGTCGGGGCTCACGAACATGTCTTCGTGCGACTG------GATGTCATCCGCGAAC 28272 || | || ||| | | |||| ||||| || || | |||||| | ||| Sbjct 4332 CGACTTTCAGGGGTTAAAAACACATCTTCATGACCTTGTACCGCGTTGTCAT---CAAAC 4388 Query 28273 GGGTCGCGGAACAGGCCGAAGTGCTTACGGGTGGCTGGTGCGAGAACCTGTTTGCGCAGT 28332 ||| |||| ||||| ||||| ||||| |||||| || | |||||||| ||| Sbjct 4389 GGGGCGCGAAACAGCCCGAAATGCTTTTTGGTGGCAGGCAGTAATACCTGTTTTTTGAGT 4448 Query 28333 AACATGGATTCCTCCAGGTTG 28353 ||||||| |||||| |||| Sbjct 4449 AACATGGTGTCCTCCTCGTTG 4469 Score = 205 bits (226), Expect = 2e-48 Identities = 317/450 (70%), Gaps = 2/450 (0%) Strand=Plus/Plus Query 10252 GCTGAAGAAATCAAGCTGCCGGACATCCAGGCGATCATGGCCGAGCACAAGGCGCTCGGC 10311 || ||||| | ||| ||||| || ||||| |||||| |||| |||||||||||| Sbjct 19646 GCCGAAGAGGTGAAGTGCCCGGAGATACAGGCCATCATGCAGGAGCGCAAGGCGCTCGGT 19705 Query 10312 ATGATCGGCAAGGTCGAGCTGCCGGGCGGCCTGGACAAGCTCGAAGGCGAGATCAAGTGG 10371 || | |||||| | ||| |||| ||| | ||||| || || || || ||||||||| Sbjct 19706 CTGGTGGGCAAGATAGAGTTGCCCTACGGTTTTGACAAACTGGAGGGAGAAATCAAGTGG 19765 Query 10372 AACTCGCTGTATGCCGACGTGGCGAAGGCGATGGCGAATCCGTTCAAGGCCGTACC-GCT 10430 ||| | || ||||| || || | | | || || ||||| | || |||| ||| Sbjct 19766 AACAGTTTCTACGCCGATGTTGCCCGGCTGGTAGCCAACCCGTTTAGCACC-TACCAGCT 19824 Query 10431 GCAATGCCGATCGAACATCGAGACGTATGGCGCACAAGGCCGCGTGCGGGAAGTCAGTCT 10490 ||| ||||| | | | || || || | || || || | ||||| | Sbjct 19825 GCAGTGCCGTTGCAGTGTTCAGCAGTTTGCCAGCCAGGGTCGGTTCAATGAAGTGCCGAT 19884 Query 10491 CGTGACGTACCTGACCGTGATGTTCAAGAAGAACCCGCTCGGCACGTACAAGCAACATGA 10550 ||||| || |||| |||||||| || ||||||||||| ||||| | |||||| ||||| Sbjct 19885 GGTGACCTATATGACGGTGATGTTTAAAAAGAACCCGCTGGGCACCTTCAAGCAGCATGA 19944 Query 10551 GAATGCCGATTTCAGCTCCTCGTTCGGCGCGACTTACATCAAGCAGGTCATCGACGGCGA 10610 | || | ||||| ||| | | || | || || ||||||||||| | || ||||| Sbjct 19945 GGATCCGGATTTAAGCAGCGCCTTTACCTGCACCTATATCAAGCAGGTGCTGGATGGCGA 20004 Query 10611 GGAAGTGCTGGAGCTGGACTATCTGGCGAACATTTTCCGCGTCGGCGGCGAAGACATGCT 10670 ||| | |||||||||||||| ||||||| ||||| ||||||||||| | || ||||| Sbjct 20005 AGAATTACTGGAGCTGGACTACATGGCGAATATTTTTCGCGTCGGCGGGGTGGATATGCT 20064 Query 10671 GGCCGACTTCCGCGCCAACATCGGGGGCTA 10700 ||| |||| ||| ||||| || || || || Sbjct 20065 GGCAGACTACCGAGCCAATATTGGTGGTTA 20094 Score = 179 bits (198), Expect = 9e-41 Identities = 311/448 (69%), Gaps = 8/448 (2%) Strand=Plus/Plus Query 3582 CAAGGGCTACGAGATCACCTGGGATTGGGAGGAGCTTTGGCAGGACGCCCAGGCGAAGGC 3641 |||||| || ||||||||||| ||||||| | | |||||||| || || || | || Sbjct 12898 CAAGGGTTATCGCATCACCTGGGACTGGGAGGCGATGTGGCAGGAAGCGCATGCCCACGC 12957 Query 3642 GTTCACGGTCGCCAAGGTCACGCGCCTGGACATCCTGCAGGACATTCGCAACGCGGTCGA 3701 || || || || || || | |||||| || || ||| |||| || ||| | || | || Sbjct 12958 CTTTACCGTGGCGAAAGTGATGCGCCTCGATATTCTGGAGGATATCCGCCAGGCACTGGA 13017 Query 3702 AACCGCAATCAGCGAAGGCAAGACGCTGCGATGGTTCACGAAGGAGCTGACGCCTGTCCT 3761 || ||| | ||||||||||| | || ||||| | ||||| || || || | || Sbjct 13018 AAACGCCCTGGCGGAAGGCAAGACCCAGCAGTGGTTTAAAAAGGAACTAACCCCCATACT 13077 Query 3762 GCAATCCAAGGGCTGGT-GGGGAAAGCAGGAACACGTCGACCAGGGCACCGGCGAG---A 3817 ||| ||||||| |||| ||||||| | | || | ||||| | ||| |||||| Sbjct 13078 GCAGGCCAAGGGATGGTGGGGGAAAACCGATAC-CACCGACCCCGTCACGGGCGAGCCAG 13136 Query 3818 TCACCCAGGTTCAGCTCGGCAGCCCGTGGCGCCTGCAGACCATCTACCGGACGAACCTGC 3877 ||||| || |||| ||||| ||||| ||| |||| || ||||| || || || Sbjct 13137 TCACC---GTCCAGCAGGGCAGTGACTGGCGGCTGGAGACGATTTACCGCACCAATCTCT 13193 Query 3878 AAACCGCCTACATGGCGGGCCGCTATGCCGAGCAAATGGCGAACGTCGGCGATCGGCCGT 3937 | ||||| || || |||| ||||| || ||| || ||| |||||||| | Sbjct 13194 CTATGCTCTACAGCGCCGGACGCTGGGCCGAACAGCAGGCCAATATCGATGATCGGCCTT 13253 Query 3938 ACTGGATGTACGTGGCGATCCTCGACAGCCGCACGCGCCCGAGCCATCGGGCAATGAACG 3997 |||||||||||||||| |||| || | || ||| ||| ||| |||| |||| || ||| Sbjct 13254 ACTGGATGTACGTGGCCATCCGTGATAACCACACACGCAAGAGTCATCTGGCACTGCACG 13313 Query 3998 GCAAGGTGTTCCGCTACGACGATCCGTT 4025 | ||| |||| || |||||||| Sbjct 13314 GATTGGTTTTCCCGGCGGATGATCCGTT 13341 Score = 176 bits (194), Expect = 1e-39 Identities = 377/554 (68%), Gaps = 12/554 (2%) Strand=Plus/Plus Query 2469 GTCGGCAAGCCGGCCGACTGGTTCGTCTACGACCCGGAGAACCAGCTCCGCTTTCGCAGC 2528 |||||||||||| | || ||||| || || | |||||||| |||||||| || Sbjct 11782 GTCGGCAAGCCGCCGGAGTGGTTTAGCTTTGATGACGGCAACCAGCTGCGCTTTCGT-GC 11840 Query 2529 AAGGAACACTGGG-TCCAGGGCGAAGAGCTGCCGGCACGCAAGTTCCTGGTG-CCGCGCC 2586 || | | ||| | || ||| |||| | |||||||| ||||| || ||| Sbjct 11841 CAGACAGGCCGGGCTGGTCGGTGAATTATTGCCCCCGCGCAAGTTTGTGGTGGCCACGCA 11900 Query 2587 AGGAAGCGACGTATCTGAACCCGTACGGCTTCCCGGACCTGTCGATGTGCTTCTGGCCGA 2646 || | ||||| | | |||||| |||||||| || |||||||||||||||||||||||| Sbjct 11901 AG-ACGCGACCTTTGAGAACCCTTACGGCTTTCCCGACCTGTCGATGTGCTTCTGGCCGG 11959 Query 2647 CCACGTTCAAGAAAGGCGGCCTCAAGTTCTGGGTGCAGTTCACCGAGAAGTACGGTTCGC 2706 |||| || || || ||| |||||| ||| || |||||||||||||| | Sbjct 11960 TGGCGTTTAAAAAGGGTGGCTGGCGTTTCTGGATGCGCTTTACCGAGAAGTACGGCAGCC 12019 Query 2707 CGATGCTGGTCGGAAAGCATCCGCGCAGCGCGTCGGACGCCGAAACCAACCTGCTGCTCG 2766 | ||| || || || || || ||| || | | || || |||| | |||||||||||| Sbjct 12020 CCTGGCTAGTTGGCAAACACCCACGCGGCACCGCTGATGCGGAAATCGACCTGCTGCTCG 12079 Query 2767 ACCGCCTGGAGGACATGGTGCAGGATGCCGTCGCGGTCATTCCCGACGATTCCAGCATCG 2826 | || || | |||||| | || || || | ||| |||||| | || |||| | | Sbjct 12080 ATTCGCTCGACAAGATGGTGGAAGACGCGGTGGTGGTTATTCCCAATGACTCCACGGTAG 12139 Query 2827 AGATCAAGGAAGCGGCCGGCAAGTCCGGTAGCGCCGACGTCTACGAACGCCTGCTGCACT 2886 | |||| ||| |||| |||||| ||| | || || | | | |||| ||| | | Sbjct 12140 AAATCATTGAATCGGCGGGCAAG---GGTGCCTCCAGCGACATCTATCGCCATCTG-ATT 12195 Query 2887 --TTTGCCGCGGCGAGGTGTCG--ATTGCCTTGCTCGGGCAGAACCAGACCACCGAGGCG 2942 || |||| | ||| |||||| |||| || || |||||||||||||| ||| Sbjct 12196 GAACTGGCGCGCTCTGAAATCGTCATTGCCCTGCTGGGTCAAAACCAGACCACCGAAGCG 12255 Query 2943 ACGTCGACGCGCGCGTCCGCGCAGGCCGGGCTTGAGGTAACGGACGACATTCGTGACGGT 3002 | | |||| ||| || ||||||||||| || || || | | || || || || || Sbjct 12256 GAGACCACGCACGCCTCGGCGCAGGCCGGACTGGAAGTCGCCGCTGATATCCGCGATGGC 12315 Query 3003 GACAAGGCGATCGT 3016 || |||||| || Sbjct 12316 GATGCGGCGATGGT 12329 Score = 141 bits (156), Expect = 2e-29 Identities = 490/749 (65%), Gaps = 33/749 (4%) Strand=Plus/Plus Query 29271 ACGTCGTATTC-CTCGCCACGGAACGACACGCGCAGTTTCGGCGTGACCTTTCGGCTTTC 29329 || |||||||| ||| || | |||||||||||| || | | | | ||||| ||||||| Sbjct 5325 ACATCGTATTCACTCCCC-CTGAACGACACGCGAAGATACTCCCTAACCTTACGGCTTTT 5383 Query 29330 CGGCGCGGCAACCGCCAGCTCTCGACAGACGTCAAGCGACGGGGCCTTGATCAGTTGCTG 29389 |||| || |||||||| |||||||| |||| ||||| |||||||| | ||||| Sbjct 5384 CGGCTTACTCACTGCCAGCTCACGACAGACTTCAACGGACGGTGCCTTGATTAACTGCTG 5443 Query 29390 GGCGGTAATGCGCATCCACGCCTCGCTACGCGTGGCACCGTGGCGGCTATGCGTTTCGGT 29449 | ||| || || | ||| ||| | || || || || | |||| | |||| Sbjct 5444 CGGGGTGATCCGTAACCAGCAGTCGGTGCGGGTCATGCCAGTACGCCGATGCAGTGCGGT 5503 Query 29450 TGCGTTGAAGTGCATGCGCCAGCGCTTCGCGAGCGCGTTCAGTTCGTCGAGGCTGGTTAC 29509 ||| | | | ||||| | | || ||| ||||| || | ||| Sbjct 5504 GCGGTTATACTTTTTACGCCATAACCCGACCAGGCGGTTGAGTTCATCAATA----TTAT 5559 Query 29510 CGGTTGG----AACTTGAGGCCCGGTTCGAACTTGCGTTCGATGAGGTTCCGCGCGTTTT 29565 || | | ||| | || | ||| || | || |||| | || ||||| |||| Sbjct 5560 CGACTTGCACAAACCGTAAACCTGATTCAAAATGGCACTCGAGAATGTCGCGCGCCTTTT 5619 Query 29566 CCACCTGTCCCGTGGCGCGTGCATTGCCGACCTTGTGCACGATCAGCTCGATACCGAGCG 29625 |||| || |||||||| ||||| ||| | || || |||| || | ||||| || | Sbjct 5620 CCACTGAGCCGGTGGCGCGGGCATTACCGGCTTTATGGGCGATAAGTTGAATACCAAGAG 5679 Query 29626 AGCGGCACAGGTTGCGGGTCATGGAGGCCGTGTTC---GCCGATCCAGCGTCGAGCATCA 29682 ||||||||||| || || | || | | || | || | |||| | || | Sbjct 5680 TTTTACACAGGTTGCG---CAGGGTAGACGAGACCAGGGCGCAACCGGGGTCG-GTATAA 5735 Query 29683 -GAATGCGCGGAACACCATGCATCAGGTCGGCGCCGCCGCGTTCCTGCATTGCGTTAATG 29741 | || ||||| |||||||||| | |||||| || ||||| || ||||| || ||| | Sbjct 5736 AGGATACGCGGCACACCATGCAGAACGTCGGCCCCACCGCGCTCTTGCATGGCATTACTC 5795 Query 29742 AGCG--TCGAGCAGAGGTTTTCGCCCGACTCCGCGCCCATCACGTACTCGGTGTAAATCC 29799 ||| ||| | | || ||| ||| | || | || | ||| || | |||||||| Sbjct 5796 AGCACATCG-GTAAAGTTTTGTGCC-GTTTCGCCCCCGAAGCGGTATTCAGCGTAAATCC 5853 Query 29800 AGTCGCTCGCGTGGTCGGAGATTTCGTAGCTCCACACACGATCCGCAGCGATCCGGGCGA 29859 || |||| | ||||||| | ||| | ||| || ||||| | || ||||| | Sbjct 5854 AGCCGCTGGTATGGTCGGTCAGTTCAAATGACCAGACGCGATCATTGACAATACGGGCCA 5913 Query 29860 GGTTCTTCGGCTTGTTCTTGTAGAACTCAGCGTGATCCATCACGCG-AAGCC-CGTTCGC 29917 | || || ||||||||||||| ||||| | | || ||||| ||| ||||| | |||| Sbjct 5914 GATTTTTGGGCTTGTTCTTGTTAAACTCCACCTCATTCATCATGCGCAAGCCGCTATCGC 5973 Query 29918 ACGCGCGTCGGCGCT-----AGG---CTTCAGGTAATACAGCACGCACAGGCTCGCGTCG 29969 | | || || || ||| ||||||||||| ||||| ||||| ||| || Sbjct 5974 GTGTG-GTGCGCCCTTTGTCAGGATTTTTCAGGTAATAGAGCACACACAGCGACGCATCC 6032 Query 29970 ATCTGCCATACGTGATTCGGATGCAGGCT 29998 | ||||| || ||||| || |||||||| Sbjct 6033 AGTTGCCAGACATGATTGGGGTGCAGGCT 6061 Score = 125 bits (138), Expect = 2e-24 Identities = 306/455 (67%), Gaps = 24/455 (5%) Strand=Plus/Plus Query 5188 GCATACGACCCGAAGGTCCACGAAGCGCCGATCGTCATCGGCCATCCGCGCGACAACGCG 5247 || ||||| ||| | | ||||| || |||||||| | || |||||||| | ||| Sbjct 14468 GCTTACGATCCGTCGCTGCACGAGGCCCCGATCGTGGTTGGGCATCCGCGTACCGACGAC 14527 Query 5248 CCGGCGTGGGGCTGGGTCGCTTCTCTCTCGGCGTCGGCCGGCAACCTGCAGGCCGAGCCG 5307 ||||| | |||||||| | || | || || | || | | ||| ||||| Sbjct 14528 CCGGCTTACGGCTGGGTAAAGTGCCTGGCCGCACAGGGGCGTGACGTACTGGCAGAGCCA 14587 Query 5308 ACCCAAGTCGATCCGGCGTTCGCCGAACTCGTCAGCGCTGGGCGCTTCAAGAAGATCAGC 5367 | ||||||| |||||||| || ||||| || | ||| ||||||||||| | Sbjct 14588 CACGAAGTCGACCCGGCGTTTGCTGAACTGGTGGCCAACAAGCGATTCAAGAAGATATCC 14647 Query 5368 GCTAGCTTCTATCACCCC-GATTCGCCGCACAACCCGACGCCCGGCGTCTACTACCTGCG 5426 || |||||| |||||| ||||| || ||||||| |||||| |||| || ||||| Sbjct 14648 GCCTCCTTCTA-CACCCCGGATTCCCCCAGTAACCCGAAACCCGGCATCTATTATCTGCG 14706 Query 5427 CCACGTCGGCTTTCTCGGCGCGCAGCCGCCGGCGCTCAAGGGCCT-----GCGCGACGTG 5481 ||| || || || || || ||||||||||| || |||||||||| ||| | Sbjct 14707 CCATGTGGGATTCCTGGGTGCGCAGCCGCCCGCTATCAAGGGCCTCAAAACCGCCTC--- 14763 Query 5482 AATTTCAGCGACGGCA-ACGAGGGTGTTGTCGAGTTCAGCGACTGGGG-----CCAGGAG 5535 |||| || | |||| | ||||| || ||||| || ||| ||||| ||| || Sbjct 14764 -ATTT--GCCAAGGCAGAAGAGGGCGTGGTCGAATTTGCCGATTGGGGGTTGACCACCAG 14820 Query 5536 CTGAACGCCGGCCTGTGGCGAAGCCTGCGCGAATGGCTTCTCACGCAATTCGGTCGGGAC 5595 || || | |||| | ||||| || | || || | |||| ||||| ||| Sbjct 14821 -TG--CGTC--ACTGTTCGCCCGGCTGCGTGACTTCTTTATCGAGAAATTTGGTCGTGAC 14875 Query 5596 ACGGCTGATCAGGTCATCCCCGACTGGCAAATCGA 5630 | || || |||||||||||| |||||||||||| Sbjct 14876 GCTGCCGACGAGGTCATCCCCGGCTGGCAAATCGA 14910 Score = 100 bits (110), Expect = 7e-17 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 18781 GGCGAGGACGGCTGGAGCCTCACCGAGTCCGACGAGGCACGGCGCGCGTTGGTCAAAGGC 18840 ||||| | |||||| || |||| |||||||| || || || ||| || | ||| | Sbjct 26945 GGCGATAATGGCTGGCATCTGGCCGAATCCGACGATGCCCGCCGGGCGATGCTGAAAAAC 27004 Query 18841 GCAATCGAGCTTCACCGCTATAAGGGCACGCCGTGGGCGGTTCGCGAAGTCATCCGGCGC 18900 || || || || ||||||||||| ||||| || ||| |||| || |||||||| || || Sbjct 27005 GCCATTGAACTGCACCGCTATAAAGGCACCCCCTGGTCGGTACGTGAAGTCATTCGCCGT 27064 Query 18901 CTGGGCTTTGGCGAGGTCGA 18920 |||||||| || || ||||| Sbjct 27065 CTGGGCTTCGGGGACGTCGA 27084 Score = 95.1 bits (104), Expect = 3e-15 Identities = 245/369 (66%), Gaps = 6/369 (2%) Strand=Plus/Plus Query 30895 CATGCGATCGATGTCGTCGAGGGTCATCCCCGCTACAGTGCCGCCGTCCGCAAGCGCCGC 30954 ||||||||| | || ||||| |||| || | | |||||||| || || || | || Sbjct 6975 CATGCGATCAACCTCATCGAGCGTCAAGCCAACAATGGTGCCGCCTTCGGCGAGTTCGGC 7034 Query 30955 AAGGTCTTCGTCGTCTTCGGCGACCAGTTCGAAAAGTTTGGTTTTGCCCAAAACGGACAG 31014 || |||||||| ||| || | || || || ||||| | ||| || | | ||| | Sbjct 7035 CAGATCTTCGTCACCTTGGGTCATCAACTCAAAGAGTTTTGCTTTTCCAAGACCGGCAAA 7094 Query 31015 CG-CTGTCCGTTTTGACTCCAGCGCTGGCGACATGAACTTGACCGATGCCGCCATCATTC 31073 || ||| ||||| |||||| | || || || | || | | || ||| || Sbjct 7095 CGTCTG-CCGTTGTGACTCTAATCTAGGTGATGTGTATTTTATGGCGGCTTGCATAATCA 7153 Query 31074 GACGCGCGGTGCGTTCGTTCAGCCCGAGCTGGT--GTTCGACGATCTCTGTGAATTCGCC 31131 |||||| || | || || || | || | ||| || |||| ||| || || || Sbjct 7154 AACGCGCTGTTCTATCAGCAAGTCCTAATTGTTCCGTT--ACAATCTTTGTAAACTCACC 7211 Query 31132 GTGCGGTTCGTTTTCCTTCAGCAGGATCAGGCGCTTCCCGGCTTCCAGCATGGCTTCGGC 31191 || || || || || || | | || || || ||||| || |||||||||||||| || Sbjct 7212 GTATGGCTCATTCTCTTTAATAATAATTAGCCGTTTCCCCGCCTCCAGCATGGCTTCCGC 7271 Query 31192 AGATTGCGCCATGTAGAAGCGCGCTTCGTTCACGACACGATGGCGTTCGTACGGCAAACC 31251 |||||||| |||||||||||||| | ||| | | | ||||| || || | || Sbjct 7272 GCTCTGCGCCATATAGAAGCGCGCTTCATGCACAATTCTCTCCCGTTCATAGGGTAGCCC 7331 Query 31252 ATCGCCAAA 31260 ||| ||||| Sbjct 7332 ATCCCCAAA 7340 Score = 93.3 bits (102), Expect = 1e-14 Identities = 178/257 (69%), Gaps = 4/257 (2%) Strand=Plus/Plus Query 8747 GCAAACTATTTGCATGGCGTCGAGACCATTGAAAAGGAAACCGGCTCGCGGCCCGTCAAG 8806 || |||||||| || ||| || |||||||| || |||| | || || || Sbjct 18008 GCTAACTATTTACACGGCCCGGAAACCATTGAGGTTGAGCGCGGCCCCCGTCCGGTACGC 18067 Query 8807 GTCGTGAAGTCGGCCGTCATCGGCCTGATCGGCACGGCGCCGATCGGGC-CTGTTAATAC 8865 | ||| || || | || || || ||||| ||||| || |||| ||||| | || ||| Sbjct 18068 GCCGTCAAATCATCGGTGATAGGACTGATAGGCACCGCCCCGA-CGGGCGCGGTGAATCA 18126 Query 8866 GCCGGTGCAGTCGCTGTCCGACGTCGACGCCGCACAGTTTGGGCCGCAGCTCGCGGGTTT 8925 ||| ||| | ||||| || |||||||| |||||||| ||| | ||| ||||| Sbjct 18127 ACCGATGCCATGCCTGTCAGAAAAGGACGCCGCCCAGTTTGGCCCGGAAATCGACGGTTT 18186 Query 8926 CACGATCCCGCAAGCGCTCGACGCGGTCTACGACTACGGCAGC-GGCACGGTGATCGTGA 8984 || || |||||||| || ||| | ||||| | || ||| || || ||| | || | Sbjct 18187 TACCATACCGCAAGCACTGCGGGCGATTTACGATCATGG-AGCAGGTACCGTGGTGGTTA 18245 Query 8985 TCAACGTGCTCGATCCG 9001 |||||||||| |||||| Sbjct 18246 TCAACGTGCTGGATCCG 18262 Score = 82.4 bits (90), Expect = 2e-11 Identities = 239/364 (66%), Gaps = 8/364 (2%) Strand=Plus/Plus Query 41 GTGCGCGAATGGCTCGAAAGCGCGCTCGTCGAGGGCAACTTCACGGGGTACCAGGAGCTG 100 ||||| ||||||||||| | ||||| |||| |||| |||| || |||| |||||| Sbjct 10353 GTGCGTGAATGGCTCGACCGGGCGCTGACCGAGCGCAATTTCAGTGGCTACCGTGAGCTG 10412 Query 101 GAGCAAACG---CTTCGTGACAAGGGCTACCAGATCAGCAAGTCGGCGATCCACCGATAC 157 || |||| || || || || || || ||| | | || ||| ||| ||| Sbjct 10413 GA---AACGTTGCTGCGGGATAAAGGGTATAGCATCGGTCGGGCGCAGATTTCCCGCTAC 10469 Query 158 GGGCAGCGTATCGAGCGCCGCTTCGCCGCGATCAAGGCGAGC-ACGGAGGCCGCGCGCAT 216 || || | |||||||||| ||||| || | ||| || ||| || ||| | Sbjct 10470 GGTCAAAAGGTGCAGCGCCGCTTTGCCGCCATTCGTGA-AGCTACCGAGATGGCACGCGT 10528 Query 217 CCTGACCGAAGGCGCGGCCGACGACCAGGACGCCCGCTCCGAGGCCGTGATCGCGCTCGT 276 | | |||||||| |||| |||||||||||| ||||| ||||| | ||||| | | Sbjct 10529 CATTACCGAAGGGGCGGAAGACGACCAGGACAAACGCTCGGAGGCGATCATCGCCACCAT 10588 Query 277 GCAGACCGAGATGTTCGAGTCCATCGTCAACCTGCAGGAAGCGACCGACGAAGACGCTGA 336 ||| |||| || | | | || || || ||| || || | || ||||| || Sbjct 10589 TCAGGCCGATATCCTGACGGCGCTCATCGACGTGCGTGAGGCCAGTGATGAAGAGATGGA 10648 Query 337 TCCGGGTGAGCGTATCGCGCTGCTGTCCAAGGCCGCAAAGAACATCGCGACGCTGGCCCG 396 |||| |||||| |||| || |||||| | || | ||| || || ||| |||| Sbjct 10649 GCCGGCAGAGCGTGCGTCGCTCTTGGCCAAGGTGGGCAAAAGCATTGCCACCCTGACCCG 10708 Query 397 CGCG 400 | || Sbjct 10709 CTCG 10712 >seq793 Length=2049 Score = 206 bits (228), Expect = 6e-49 Identities = 442/648 (68%), Gaps = 12/648 (2%) Strand=Plus/Minus Query 9497 GGCACGATCAACTTCAACACGTCCAGCGACCGCGTACGCCTCTGCTACCCGCACGTGAAG 9556 ||| |||| || || || || || ||||| |||||||| || || ||||| || ||| Sbjct 2017 GGCTCGATTAATTTTAATACCGCCTCTGACCGGGTACGCCTGTGTTATCCGCAGGTCAAG 1958 Query 9557 GTCTATGACATCGCGACCAACGCAGAG-CGCCTGGAGCCGCTCTCGTCGCGCGCAGCGGG 9615 |||||||||| || || ||| |||| | |||||||||||| ||| ||| ||| ||||| Sbjct 1957 GTCTATGACAATGCAACAAAC-CAGACTCACCTGGAGCCGCTGTCGGCGCACGCGGCGGG 1899 Query 9616 CCTTCGCGCACGCGTCGACCTGGACAAGGGCTACTGGTGGTCCAGCTCGAATCAGCAGCT 9675 || | || || || | ||| || || | ||||||||| || |||||| ||| Sbjct 1898 TCTGAGGGCCAAAGTGGATCGGGAAAAAGGGTTCTGGTGGTCGTCTTCCAATCAGGCGCT 1839 Query 9676 CGTCGGCGTCACGGGCGTCGAACGACCGCTGTCGGCGATGATCGACGATCCGCAATCG-G 9734 | || | || || || || ||| | ||| || || || | |||| | | Sbjct 1838 GATGGGTATTGTAGGGGTTGAGCGCCCGTTAAGTGCGCGCATTGATGACGC-CAATAGCG 1780 Query 9735 ACGTGAACATGCTCAACGAACAGGGCATCACGACCGTCTTCAGCTCGTACGGCTCGGGCC 9794 | || || |||| ||| | | ||||| || || || || | | | || || Sbjct 1779 AGGTCAATCTGCTTAACCAGAACGGCATTACCACGGTGTTTAACAGCTTTGGTAGCGGAT 1720 Query 9795 TGCGCCTGTGGGGCAACCGCACGGCGGCATGGCCGACTGTCACGCACATGCGGAACTTCG 9854 | |||||||||||||||||||| ||||| |||||||| || ||||| || ||| || | Sbjct 1719 TACGCCTGTGGGGCAACCGCACCGCGGCCTGGCCGACCGTGACGCATCTGAAGAATTTTG 1660 Query 9855 AGAACGTGCGTCGTACCGGCGACGTCATCAACGAATCGCTGCGCTACTTCAGCCAGCAGT 9914 | || ||||| |||||||| ||| | || || || || | ||| | ||||| | ||| | Sbjct 1659 AAAATGTGCGGCGTACCGGGGACATGATTAATGAGTCTATCCGCCATTTCAGTCTGCAAT 1600 Query 9915 TCGTCGA-CGCGCCGATCGACCAGGGGCTGATCGATTCGCTGGTCGAGTCGGTGAACGGC 9973 | || ||| || || ||||||||||| ||| ||||| ||| || || || ||| Sbjct 1599 ATATTGATCGC-CCCATTAGTCAGGGGCTGATTGATGCGCTGACCGAATCCGTCAATGGC 1541 Query 9974 TTCGGCCGCAAGCTAATCGGCGACGGCGCGCTGCTCGG-CTTCAAGGCATGGTTCGATCC 10032 | ||||| ||| || | ||| || |||||||| || |||| || |||| ||||| Sbjct 1540 TATGGCCGTCGGCTGATTGCCGATGGGGCGCTGCTGGGTTTTCACTGC-TGGTATGATCC 1482 Query 10033 GGCCCGCAACCCGAAGGAGGAGCT--GGCGGCCGGCCACCTGCTCATCAACTACAAGTAC 10090 ||| |||| | | ||| | ||| | | | || || || | || ||||| ||| Sbjct 1481 GGCGAACAACACCAGGGATGCGCTCAGTCTG--GGGCAGTTGAAACTGAATTACAAATAC 1424 Query 10091 ACGGTGCCGCCGCCGCTCGAACGTCTGACGTACGAGACCGAGATCACC 10138 || |||||||||| | || | |||||| | || || || |||||| Sbjct 1423 ACCCCGCCGCCGCCGATGGAGCATCTGACCTTTGAAACAGAAATCACC 1376 >seq550 Length=29371 Score = 111 bits (122), Expect = 4e-20 Identities = 266/391 (68%), Gaps = 16/391 (4%) Strand=Plus/Plus Query 25915 GCGATGTCGAGCGGAATCTGGACG-TATTGATCGGTGTCGCCGACGCGCTCGTAGACGCG 25973 ||||| || |||| | | || || ||||| |||| ||| ||| |||||||| | ||| Sbjct 22772 GCGATATCCAGCGACAGC-GGCCGATATTGCCCGGTCTCGTCGATACGCTCGTAAAGGCG 22830 Query 25974 GACATACGACTTGCTGCCGATCACCTGGAGCGCCTCGCCGATCGCTCGCATCGCTTCCAG 26033 | || |||||||| || |||||| | ||| || | | ||| ||| || || Sbjct 22831 AATGTAGCTCTTGCTGCTGACCACCTGCACCGCTTCCGCCAGCGCATCCATTGCCCGCAA 22890 Query 26034 CCAGCGCGGATCGGTGATGTCCAGTCGGCGCAGC-GC-GAGCACGCGCCCGGTGTTGATC 26091 ||||||||| ||||| || || | || ||| || || || ||| ||| | | ||| Sbjct 22891 CCAGCGCGGGTCGGTAATATCATGGCGACGCCGCTGCAGAATACGGGCCGGATTAATATC 22950 Query 26092 TGGCCTTCCTTGTCGGTCGCAAACGCCTGCGTCACGA-TCGCCTGAATCTCAGGGCGGGC 26150 | || | ||||||||| | ||| ||||| |||| | | ||| | | ||| || || || Sbjct 22951 T--CCGTTCTTGTCGGTGGAAAATGCCTG-GTCAATAATGGCCAGCAGCTCCGGTCGCGC 23007 Query 26151 GTCCGTGGTCCAGTCACGCAGACACTCGTCGATCATGGATTTGGCGGCCTGCAGGCGCTC 26210 | | ||||| || || || || || |||| | ||||||||||| | ||||| Sbjct 23008 ATTCTGCGTCCATTCCGTCATGCAATCATCAATCAATGCCTTGGCGGCCTGAATACGCTC 23067 Query 26211 GTCGAACGCAATGCGGTCCTGGATGGCCCGCTGGAT----TCGATAGCGACCGTCGAACG 26266 || || | |||||||||||| | ||| | |||| | | ||||| || || || | Sbjct 23068 ATCAAAGGTAATGCGGTCCTGCAGGGCGC---GGATAACCTTG-TAGCGGCCATCAAAGG 23123 Query 26267 AGTACAGTGTGACGTTGCCCTTCTTACCGCC 26297 | ||||| || || ||||| || | ||||| Sbjct 23124 AATACAGCGTCACATTGCCTTTTCTGCCGCC 23154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119703253096896