Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20brevipalpis_20[genbank_20GCA_5F000671755.1_202014-05-08] 1,651 sequences; 315,360,362 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq54 100 3e-16 >seq54 Length=1370671 Score = 100 bits (110), Expect = 3e-16 Identities = 155/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 20180 ATATGCGTTTTGTAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGA 20239 ||||| ||||||| || |||| ||| || ||||| | ||| || || ||| |||| Sbjct 1327340 ATATGATTTTTGTATATATGGGTATCACCGGTTGTGTGCACAAAGTCGCCTGGTTTAAGG 1327281 Query 20240 CCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACT 20299 || || | ||| |||| ||| | |||||||||| ||| ||| || ||||| || || Sbjct 1327280 CCGGTTAAATGTGCAATCATGTTCGTTAAGAGGGCATACGAGGCTATATTAAAGGGGACA 1327221 Query 20300 CCCAAACCCATGTCTCC-CGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTAC 20358 ||||| ||||| ||| | | || | ||||| || || ||| | | ||| | || || Sbjct 1327220 CCCAAGCCCATATCTGCACTACGT-TGATAAAGTTGGCAGCACAATTCATTATTGGCCAC 1327162 Query 20359 ATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCAT 20397 |||||||||| || | |||||||| || | ||||| Sbjct 1327161 ATAAAATTGAGCCAAGCAATGACAGGGTGGTAAAGCCAT 1327123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441363691168840