Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20brevipalpis_20[genbank_20GCA_5F000671755.1_202014-05-08] 1,651 sequences; 315,360,362 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq1 82.4 6e-11 >seq1 Length=10097680 Score = 82.4 bits (90), Expect = 6e-11 Identities = 160/235 (68%), Gaps = 6/235 (3%) Strand=Plus/Minus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| |||| || || || |||| ||| | || || ||||| || |||||||| | Sbjct 7547616 ACCACCTCGCAAACGAAGTACCAAATGCAATGTCGATTCTTTCTGTATATTGTAATCAGA 7547557 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 ||| ||| | || |||||||| ||||| || || |||| || |||||||| || Sbjct 7547556 CAAAGTCCGCCCATCTTCCAATTGTTTGCCAGCGAAGATCAAACGTTGCTGATCTGGAGG 7547497 Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTA---TCAGTAGATTC 34076 | || |||||||||| |||||| ||| | | | || || || | || || Sbjct 7547496 AATGCCCTCTTTGTCCTGAATTTTGGCCTTGAC---ATTTTCAATAGTGTCGGAAGGCTC 7547440 Query 34077 GCATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATTTTT 34131 ||| | || |||||||| || || || ||||| || || |||||||||||| Sbjct 7547439 AACTTCCAAAGTAATTGTTTTGCCAGTAAGAGTTTTAACGAAAATTTGCATTTTT 7547385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397054410484102