Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20brevipalpis_20[genbank_20GCA_5F000671755.1_202014-05-08] 1,651 sequences; 315,360,362 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq24 93.3 3e-14 >seq24 Length=2399868 Score = 93.3 bits (102), Expect = 3e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 118179 CCGTCGCGACCGGCCCTTCCTATCTCTTGATAATAACCGTCCAGTGATTTGGGCATACTG 118238 || ||||| || || | |||| |||||||| ||||| || | |||||||||||| Sbjct 1228150 CCATCGCGTCCAGCACGTCCTGCTTCTTGATAGTAACCTTCAATCGATTTGGGCATAGAA 1228091 Query 118239 TGATGTATCACCAACCGCACGTCGGGTTTATCGATGCCCATCCCGAACGCTATCGTCGAA 118298 ||||| || || || || |||||||||||||||||||| || || || | |||| | Sbjct 1228090 AAATGTAAAACAAAACGTACATCGGGTTTATCGATGCCCATACCAAAGGCGACTGTCGCA 1228031 Query 118299 CATATCACTCGGGTCTCGTTCGCCATCCA 118327 |||||||| || || ||| | ||||| Sbjct 1228030 CATATCACACGAAACTTGTTTGTTATCCA 1228002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381765118134744