Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20brevipalpis_20[genbank_20GCA_5F000671755.1_202014-05-08] 1,651 sequences; 315,360,362 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq148 286 3e-72 seq240 188 6e-43 seq53 154 1e-32 seq89 150 2e-31 seq308 145 7e-30 seq1 134 1e-26 >seq148 Length=545759 Score = 286 bits (316), Expect = 3e-72 Identities = 922/1416 (65%), Gaps = 39/1416 (3%) Strand=Plus/Plus Query 123279 GGCGGCAAACGCAAAGGCGCGATGGCGATCTATCTAGAACCGTGGCACGTTGATGTGTAC 123338 || || ||||| ||| || | || || || | || || ||||||| ||||| | | Sbjct 220273 GGTGGAAAACGTCCAGGTGCTTTTGCTATGTACTTGGAGCCTTGGCACGCAGATGTTTTC 220332 Query 123339 GATTTTTTAAATTTAAAACGCAACATGGGGGCGGAAGAAAAGAAAGCCCGCGATTTGTTG 123398 || ||| || |||| ||| || | || | ||| || | ||| ||||||||||| Sbjct 220333 GAATTTCTAGATTTGAAAAAGAATTTTGGTGAGGAGAAAGATCGAGCACGCGATTTGTTT 220392 Query 123399 TACGCTTTATGGGTACCCGATTTGTTTATGCGACGCGTAAAAGACGACGGCGTGTGGTCG 123458 || || ||||| |||| ||| |||| ||| | | ||| | || || |||| ||||| Sbjct 220393 TATGCCCTATGGATACCGGATCTGTTCATGAAAAGAGTAGAGGATGATGGCGATTGGTCT 220452 Query 123459 CTCATGTGTCCCGATCGGTGTCCCGGCTTGAGCGACGTTTACGGCAATCAGTTTGACGAG 123518 || |||||||| || ||||| || ||| | || |||| || || | |||||| | Sbjct 220453 CTAATGTGTCCTCATAAATGTCCTGGTTTGTGTGAAGTTTGGGGAGATGAATTTGACAAA 220512 Query 123519 TTGTACGCGCAATACGAGCGCGAAGGCAAACAGGTT-AGTCAGGTTCCGGCACGTGATTT 123577 || ||| | ||||||| | || |||||| | | | || || || |||| || Sbjct 220513 TTATACATGAAATACGAAAGTGAGGGCAAAGCGAATCAAACAA-TTAAAGCTCGTGCCTT 220571 Query 123578 GTTCAAATTT--ATTATCGAAA-CACAAGTCGAAACCGGAACGCCGTACATGCTCTACAA 123634 || ||| | ||| || | |||| || || ||||| || || ||||| ||||| Sbjct 220572 GTGG---TTTGCAATATGCAAGTCTCAAGCGGAGACTGGAACTCCTTATATGCTTTACAA 220628 Query 123635 AGACGCCTGCAACAGGAAAACCAATCAGAGCAACTTGGGAACAATAAAATGTAGTAATCT 123694 ||| || ||||| | || | ||||| ||| | || || ||||||| |||||| | Sbjct 220629 AGATGCTTGCAATCGCAAGAGTAATCAACAGAACATTGGTACTATAAAATCTAGTAACTT 220688 Query 123695 TTGCTCCGAAATTATCGAATACAGCGATGCCGATCAAGTGGCCGTGTGTAATTTGGCTTC 123754 || | |||||| ||||||||| || ||| || | || || || || |||| || Sbjct 220689 GTGTACAGAAATTGTCGAATACACTTCGGCTGATGAAATTGCAGTTTGCAACCTGGCCTC 220748 Query 123755 GATTTGCGTGAATCGT-TGCGT-----CG----AAAACGGCGCTTTTAATTTCCAAACGC 123804 |||| || | || | | | ||| || |||| || |||||| |||| Sbjct 220749 GATT-GCATTAAACATGTTCGTGACTACGGATAAAAAATACGATTTTAA----CAAAT-- 220801 Query 123805 TCAAACGCATAACAAAAACTGTAGTAAAGAATTTGAACAAAATTATCGATGTTAATTTTT 123864 | ||| | || || | || || ||| | |||||||| || || |||| | || Sbjct 220802 TGAAAGAAGTTACGAAGCTTATAACAAGGAACCTCAACAAAATAATTGACATTAACTATT 220861 Query 123865 ATCCTTTGGAGGAAGCGCGTTTGTCTAATTTGAAACACAGACCGGTCGGAGTGGGCATTC 123924 |||| ||| |||||| ||||||||| ||| | || | || | ||| | | Sbjct 220862 ATCCGTTGCCGGAAGCCAAAAGATCTAATTTGCGTCACCGTCCAATTGGTATAGGCGTCC 220921 Query 123925 AAGGGTTGGCCGACGCGTTTGTAATGCTGCGCATGCCGTACGAAAGCGACGAAGCAAAGT 123984 |||| || || ||||| || | | |||| || || |||||||| | || Sbjct 220922 AAGGATTTGCTGACGCATTAATTTTAATGCGTTATCCATATGAAAGCGAAAATGCTGTTC 220981 Query 123985 TGCTTAATACGCAAATAGCCGAAACAATTTATTACGGCGCTTTGGAGGCGAGCTGCGAAC 124044 | | ||| ||||| |||||| || |||||||| ||||| ||||| ||||| || Sbjct 220982 TATTAAATCAACAAATTTTCGAAACCATATATTACGGTGCTTTAGAGGCTAGCTGTGAGT 221041 Query 124045 TTGCGAAAATTCACGGCGCGTACGAAAGTTACGCGGGCAGCCCGGCGAGCCGAGGTATTT 124104 | || ||| | ||| ||||||||| || | || ||||| | ||| ||||||| Sbjct 221042 TGGCCAAACAATATGGCCCGTACGAAACATATGAAGGTAGCCCAGTTAGCAAAGGTATTC 221101 Query 124105 TGCAGTACGACATGTGGAATGCTACACCGACAAATTTGTGGGACTGGAGCGTTTTAAAAC 124164 | || || ||||||||||| | || || || | ||||| ||| | | | ||| Sbjct 221102 TTCAATATGACATGTGGAACAAGAAGCCTACTGATCTTTGGGATTGGGCGGCTCTTAAAG 221161 Query 124165 AACGCATATCGACGCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGCCGACGGCAA 124224 | ||| | || ||| ||||||| || |||||||||| ||||| |||||| Sbjct 221162 ATGACATCAAAAATCATGGTGTGCGTAATTCTTTGTTGGTGGCCCCAATGCCTACGGCAT 221221 Query 124225 CCACTGCTCAAATTTTAGGAAACAACGAATCCTTCGAGCCGTTCACT--AACAATTTGTA 124282 | |||||||||||| | || |||||||||||||| ||||||| ||| || ||| || Sbjct 221222 CTACTGCTCAAATTCTTGGCAACAACGAATCCTTTGAGCCGTATACTTCAAACGTTTATA 221281 Query 124283 CGTGCGACGAGTGTTAGCCGGCGATTTTCAAGTGATAAATCATCATTTGGTGGACGACTT 124342 | ||||| || ||| | || ||||| ||| | |||||||||||| | | || || Sbjct 221282 C--ACGACGTGTATTATCTGGTGATTTCATTGTGGTCAATCATCATTTGCTTAAAGATTT 221339 Query 124343 GGTGGCGTTAAATTTGTACGATGAAAACATGCGCAACGAAATTATTGCGGCC----GGTG 124398 | || ||| ||| | | ||| ||||| | || ||||| || | ||| Sbjct 221340 GACGGAGTTGAATCTTTGGAATGGCGACATG----AAAAACTTATTATGGGCACATCGTG 221395 Query 124399 GCAGCGTGCAGCGCATCGCTTCGATTCCGGAACACGTCAAGCAACTGTACAAAACCGTGT 124458 | | || |||| | || || || || | || || | || ||||| || | Sbjct 221396 GTTCAATACAAAAAATCGAAGCCATACCTAAAGACATAAAAGAATTATATAAAACAGTTT 221455 Query 124459 GGGAAATGAAAAATAAACGATTAATTGAAATGGCCGTCGACCGAGGCGCGTACACGGATC 124518 ||||||| | || | |||||| ||||| ||||| || ||||| | || |||| Sbjct 221456 GGGAAATTTCACTGAAGTCAACAATTGACATGGCTGTCGATCGCGGCGCTTTCATCGATC 221515 Query 124519 AAAGTCAATCTTTTAACGTGTTTGTAGCGGAACCCACCTACGCCCGCATGACCAGCATAC 124578 |||| ||||| |||||||| | | || || | | || | || || ||| | Sbjct 221516 AAAGCCAATCGTTTAACGTACATATGGCTGACGCTAGTTATGGTAAATTGTCCTCCATGC 221575 Query 124579 ACATGCACGCGTGGAGCAGC-GGACTCAAAACGGGCATGTATTACTTAAGAACCAAACCG 124637 | | | | |||| ||| || | ||||| || |||||||| |||| || || || Sbjct 221576 ATTTTTATGGATGGA-AAGCGGGTTTGAAAACTGGTATGTATTATCTAAGGACAAAGCCA 221634 Query 124638 GCGGCCGATGCCATTCAATTTACCGTCGACAAATCT 124673 || || || |||| |||||||| ||||| ||| || Sbjct 221635 GCATCCAATCCCATACAATTTACAGTCGATAAAACT 221670 >seq240 Length=301270 Score = 188 bits (208), Expect = 6e-43 Identities = 646/1000 (65%), Gaps = 23/1000 (2%) Strand=Plus/Plus Query 123285 AAACGCAAAGGCGCGATGGCGATCTATCTAGAACCGTGGCACGTTGATGTGTACGATTTT 123344 ||||| |||| || | || || || | || || ||||| | ||| | | ||| ||| Sbjct 293233 AAACGTCAAGGTGCTCTTGCTATATACTTGGAGCCTTGGCATGCAGATATTTTCGAATTT 293292 Query 123345 TTAAATTTAAAACGCAACATGGGGGCGGAAGAAAAGAAAGCCCGCGATTTGTTGTACGCT 123404 ||||||| ||| | | | || ||| ||||| | || ||||| || || Sbjct 293293 CTAAATTTGAAAAGGGATACTGGTAAGGAGGAAAACCGTCCACGTGATTTACATTATGCC 293352 Query 123405 TTATGGGTACCCGATTTGTTTATGCGACGCGTAAAAGACGACGGCGTGTGGTCGCTCATG 123464 ||||| |||| ||| | || ||| | | ||| | | || |||| ||||| || ||| Sbjct 293353 CTATGGATACCGGATCTTTTCATGAAAAGAGTAGAGGCTGATGGCGATTGGTCTCTAATG 293412 Query 123465 TGTCCCGATCGGTGTCCCGGCTTGAGCGACGTTTACGGCAATCAGTTTGACGAGTTGTAC 123524 ||||| || || || || ||| | || |||| || || | |||||| | || ||| Sbjct 293413 TGTCCTCATAAATGCCCTGGTTTGTGTGAAGTTTGGGGACATGAATTTGACAAATTATAC 293472 Query 123525 GCGCAATACGAGCGCGAAGGCAAACAGGTTAGTCAGGTTCCGGCACGTGATTTGT---TC 123581 | ||||||| | || |||||| | || || || |||| |||| || Sbjct 293473 ATGAAATACGAAAGTGAGGGCAAAGCGAATAAAACAATTAAAGCTCGTGCCTTGTGGTTC 293532 Query 123582 A-AATTTATTATCGAAACACAAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGC 123640 ||| || | | |||| || || ||| | || || ||||| |||||||| || Sbjct 293533 GCAATATACAGTG----CTCAAGAAGAGACTGGAGCTCCTTATATGCTTTACAAAGATGC 293588 Query 123641 CTGCAACAGGAAAACCAATCAGAGCAACTTGGGAACAATAAAATGTAGTAATCTTTGCTC 123700 ||||| | |||| |||||| | ||| | || ||||||||||||||||| || | | Sbjct 293589 TTGCAATCGCAAAAGCAATCAAGGGAACATTGGTACAATAAAATGTAGTAACTTTAGTAC 293648 Query 123701 CGAAATTATCGAATACAGCGATGCCGATCAAGTGGCCGTGTGTAATTTGGCTTCGATTTG 123760 |||||| ||||||| | | ||| || | || || || || |||| || ||| | Sbjct 293649 AGAAATTGTCGAATATACATCAGTTGATGAAATTGCAGTTTGCAACCTGGCCTCAATT-G 293707 Query 123761 CGTGAATCGT-TGCGTCGAAAACGGCG--------CTTTTAATTTCCAAACGCTCAAACG 123811 || || | | | ||| || |||| | | || ||| |||| | ||| Sbjct 293708 CGCTAAACATGTTCGT-GACTACGGAGAAACAATACGATT--TTTACAAAT--TGAAAGA 293762 Query 123812 CATAACAAAAACTGTAGTAAAGAATTTGAACAAAATTATCGATGTTAATTTTTATCCTTT 123871 | ||||| | || |||||| | |||||||| || || |||| | ||||| | Sbjct 293763 AGTTACAAAGCTTATAACAAAGAACCTCAACAAAATAATTGACATTAACTACTATCCGCT 293822 Query 123872 GGAGGAAGCGCGTTTGTCTAATTTGAAACACAGACCGGTCGGAGTGGGCATTCAAGGGTT 123931 | |||| | |||||| || ||| | ||| | | | || | ||||| || Sbjct 293823 GCCGGAAACCAAAAAATCTAATATGCGTCACCGTCCGATTGCTATAGGTGTCCAAGGATT 293882 Query 123932 GGCCGACGCGTTTGTAATGCTGCGCATGCCGTACGAAAGCGACGAAGCAAAGTTGCTTAA 123991 || |||||||| | | |||| || ||||| ||||| | || | | || Sbjct 293883 TGCTGACGCGTTAATTTTAATGCGTTATCCATACGAGAGCGAAAATGCTGTTCTATTAAA 293942 Query 123992 TACGCAAATAGCCGAAACAATTTATTACGGCGCTTTGGAGGCGAGCTGCGAACTTGCGAA 124051 | ||||| |||||| || |||||||| || || ||||| ||||| || | || || Sbjct 293943 TCAACAAATTTTCGAAACTATATATTACGGTGCGTTAGAGGCTAGCTGTGAGTTGGCCAA 294002 Query 124052 AATTCACGGCGCGTACGAAAGTTACGCGGGCAGCCCGGCGAGCCGAGGTATTTTGCAGTA 124111 | | ||| ||||||||| || | || ||||| | ||| ||| ||| | || || Sbjct 294003 ACAATATGGCCCGTACGAAACATATGAAGGTAGCCCAGTTAGCAAAGGCATTCTTCAATA 294062 Query 124112 CGACATGTGGAATGCTACACCGACAAATTTGTGGGACTGGAGCGTTTTAAAACAACGCAT 124171 ||||||||||| || || || || | ||||||||| | | | ||| ||| ||| Sbjct 294063 TGACATGTGGAACAAGACGCCTACTGATCTTTGGGACTGGGCGGCTCTTAAAGAACACAT 294122 Query 124172 ATCGACGCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGCCGACGGCAACCACTGC 124231 | | || ||| |||||||||| |||||||||| ||||| | ||| | |||| Sbjct 294123 AAAAATTCATGGTGTGCGTAACTCTTTGTTGGTGGCTGCAATGCCTGCAGCATCTGCTGC 294182 Query 124232 TCAAATTTTAGGAAACAACGAATCCTTCGAGCCGTTCACT 124271 ||||||| | ||||||||| | || || ||||| | |||| Sbjct 294183 TCAAATTCTGGGAAACAACCAGTCTTTTGAGCCATACACT 294222 >seq53 Length=1361919 Score = 154 bits (170), Expect = 1e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || ||||| | | |||||||| ||||| |||||||| || || || || ||||| Sbjct 1239990 ATGCCACCGCGCAAACGCAACACTAAATGCAAGGTTGATTCTTTCTGTATGTTGTAATCC 1239931 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || || | ||| ||||||||||| || ||| | ||||| || |||||||| || Sbjct 1239930 GAGAGAGTGCGACCATCTTCCAATTGTTTACCAGCGAAGATCAAACGCTGCTGGTCTGGG 1239871 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| ||||| |||||||| || || ||| | ||| || |||||||||| ||| Sbjct 1239870 GGAATACCTTCCTTATCTTGGATCTTAGCTTTAACGTTTTCAACAGTGTCGGAAGGCTCT 1239811 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || | ||||| |||||||| || | |||||| |||||||||||||| Sbjct 1239810 ACCTCCAAAGTAATGGTTTTGCCAGTCAAAGTTTTAACAAAAATTTGCAT 1239761 Score = 138 bits (152), Expect = 1e-27 Identities = 169/229 (74%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 |||||||| || | || |||| ||| || |||||||| ||||||||||| |||||| | Sbjct 1241789 CCTCCGCGAAGACGTAAGACTAAATGGAGTGTTGATTCTTTTTGGATATTTTAATCG--G 1241732 Query 45174 ACGGTTTTAGAA--TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCG 45231 || | | | || ||||||||||| || || | ||||| || || || || || | Sbjct 1241731 ACAGAGTGCGCCCGTCTTCCAATTGTTTGCCAGCAAAGATCAAACGCTGTTGATCGGGAG 1241672 Query 45232 GAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGA 45291 ||| ||||| |||||||| |||||| ||| | || ||| | || || || | ||| | Sbjct 1241671 AAATACCTTCCTTATCTTGGATTTTTGCTTTAACCGTTTCGATAGTATCCGACGGCTCTA 1241612 Query 45292 CTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | || | ||||| |||||||| || | |||||| ||||| |||||||| Sbjct 1241611 CCTCCAAAGTAATAGTTTTGCCAGTCAAAGTTTTAACAAAGATTTGCAT 1241563 Score = 136 bits (150), Expect = 4e-27 Identities = 173/238 (73%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || || || | || || | ||| || || || |||||||| || ||||||||| Sbjct 1234465 ATACCACCACGCAGGCGTAAGACCAAATGGAGAGTAGACTCCTTTTGAATGTTATAATCG 1234406 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || || ||| ||||||||||| || ||| | ||||| || |||||||| || Sbjct 1234405 GAGAGAGTACGGCCATCTTCCAATTGTTTACCAGCGAAGATCAAACGCTGCTGGTCTGGG 1234346 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| ||||| ||||| || || || ||||| ||| | ||| ||||||| |||| Sbjct 1234345 GGAATACCTTCCTTATCCTGGATCTTAGCTTTGACGTTTTCAATGGTATCGGAAGGCTCG 1234286 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATCGCGCGAC 45348 ||||| | ||| | ||||| ||||| | |||||| || || |||||||| ||| || Sbjct 1234285 ACTTCCAAAGTGATGGTTTTACCGGTCAAAGTTTTGACGAAGATTTGCATACCGCCAC 1234228 Score = 131 bits (144), Expect = 2e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 ||||| |||||||| | |||||| | ||||| |||||||| || || ||||| || || Sbjct 1240446 ATTCCACCGCGGAGACGCAACACCAAATGCAAAGTTGATTCTTTCTGTATATTGTAGTCC 1240387 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || || | || |||| ||||| || || | ||||| || |||||||| || Sbjct 1240386 GAGAGAGTACGACCGTCTTCCAGCTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGA 1240327 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| ||||||||||||||||||||| || | ||| | || || || | || Sbjct 1240326 GGAATACCTTCTTTATCTTGAATTTTTGCCTTAACGTTTTCGATAGTATCCGATGGTTCT 1240267 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || | ||||| |||||||| || | |||||| ||||| |||||||| Sbjct 1240266 ACCTCCAAAGTAATGGTTTTGCCAGTCAAAGTTTTAACAAATATTTGCAT 1240217 Score = 131 bits (144), Expect = 2e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 ||||| |||||||| | || ||| | ||||| |||||||| || || ||||| ||||| Sbjct 1241564 ATTCCACCGCGGAGACGCAGCACCAAATGCAAAGTTGATTCTTTCTGTATATTGTAATCC 1241505 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || | || || |||||||| || || | ||||| || ||||| || || Sbjct 1241504 GAAAGAGTGCGACCGTCTTCTAATTGTTTGCCAGCAAAGATCAAACGCTGCTGATCTGGA 1241445 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| ||||||||||||||||||||| ||| | ||| | || || || | || Sbjct 1241444 GGAATACCTTCTTTATCTTGAATTTTTGCTTTAACGTTTTCGATAGTATCTGATGGTTCT 1241385 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || | ||||| | |||||| || | |||||||||||| |||||||| Sbjct 1241384 ACCTCCAAAGTAATGGATTTGCCAGTCAAAGTTTTTACAAAGATTTGCAT 1241335 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 ||||| || ||||| | |||||| | ||||| || ||||||||||| | ||| ||||| Sbjct 1240218 ATTCCACCACGGAGACGCAACACCAAATGCAATGTAGATTCCTTTTGTACATTGTAATCC 1240159 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || || || |||||||| || || | ||||| || ||||| || || Sbjct 1240158 GAAAGAGTGCGGCCGTCTTCTAATTGTTTGCCAGCAAAAATCAAACGCTGCTGATCTGGA 1240099 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| ||||||||||||||||||||| ||| | ||| | || || || | || Sbjct 1240098 GGAATACCTTCTTTATCTTGAATTTTTGCTTTAACGTTTTCGATAGTATCCGATGGTTCT 1240039 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| | ||||| ||||| || || | |||||| ||||| || ||||| Sbjct 1240038 ACTTCCAAAGTAATGGTTTTTCCAGTCAAAGTTTTAACAAAGATCTGCAT 1239989 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/214 (69%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 45129 AACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA--T 45186 || || | ||||| ||| ||||||||||| ||||| ||||| ||| | | | | Sbjct 1232783 AAGACCAAATGCAACGTAGATTCCTTTTGTATATTGTAATCA--GACAATGTGCGCCCGT 1232726 Query 45187 CGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTAT 45246 | || || ||||| || ||| | || || || || || || || || || ||||| |||| Sbjct 1232725 CTTCTAACTGTTTACCAGCGAAGATTAAACGCTGTTGATCTGGTGGGATTCCTTCCTTAT 1232666 Query 45247 CTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCG 45306 ||||||| || || | || | || ||||||| ||| || || | || | | Sbjct 1232665 CTTGAATCTTAGCCTTAACATTCTCAATAGTATCGGAAGGCTCAACCTCCAAGGTGATAG 1232606 Query 45307 TTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||||| || | || || |||||||||||||| Sbjct 1232605 TTTTGCCAGTCAATGTCTTGACAAAAATTTGCAT 1232572 >seq89 Length=807233 Score = 150 bits (166), Expect = 2e-31 Identities = 427/651 (66%), Gaps = 15/651 (2%) Strand=Plus/Minus Query 123630 TACAAAGACGCCTGCAACAGGAAAACCAATCAGAGCAACTTGGGAACAATAAAATGTAGT 123689 |||||||| || ||||| | |||| |||||| | ||| | || ||||||||||||||| Sbjct 807232 TACAAAGATGCTTGCAATCGCAAAAGCAATCAAGGGAACATTGGTACAATAAAATGTAGT 807173 Query 123690 AATCTTTGCTCCGAAATTATCGAATACAGCGATGCCGATCAAGTGGCCGTGTGTAATTTG 123749 || || | | |||||| ||||||| | | ||| || | || || || || || Sbjct 807172 AACTTTAGTACAGAAATTGTCGAATATACATCAGTTGATGAAATTGCAGTTTGCAACCTG 807113 Query 123750 GCTTCGATTTGCGTGAATCGT-TGCGTCGAAAACGGCG--------CTTTTAATTTCCAA 123800 | || ||| ||| || | | | ||| || |||| | | || ||| ||| Sbjct 807112 GGCTCAATT-GCGCTAAACATGTTCGT-GACTACGGAGAAACAATACGATT--TTTACAA 807057 Query 123801 ACGCTCAAACGCATAACAAAAACTGTAGTAAAGAATTTGAACAAAATTATCGATGTTAAT 123860 | | ||| | ||||| | || |||||| | |||||||| || || |||| Sbjct 807056 AT--TGAAAGAAGTTACAAAGCTTATAACAAAGAACCTCAACAAAATAATTGACATTAAC 806999 Query 123861 TTTTATCCTTTGGAGGAAGCGCGTTTGTCTAATTTGAAACACAGACCGGTCGGAGTGGGC 123920 | ||||| || |||| | |||||| || ||| | ||| | | | || Sbjct 806998 TACTATCCGCTGCCGGAAACCAAAAAATCTAATATGCGTCACCGTCCGATTGCTATAGGT 806939 Query 123921 ATTCAAGGGTTGGCCGACGCGTTTGTAATGCTGCGCATGCCGTACGAAAGCGACGAAGCA 123980 | ||||| || || |||||||| | | |||| || ||||| ||||| | || Sbjct 806938 GTCCAAGGATTTGCTGACGCGTTAATTTTAATGCGTTATCCATACGAGAGCGAAAATGCT 806879 Query 123981 AAGTTGCTTAATACGCAAATAGCCGAAACAATTTATTACGGCGCTTTGGAGGCGAGCTGC 124040 | | ||| ||||| |||||| || |||||||| || || ||||| ||||| Sbjct 806878 GTTCTATTAAATCAACAAATTTTCGAAACTATATATTACGGTGCGTTAGAGGCTAGCTGT 806819 Query 124041 GAACTTGCGAAAATTCACGGCGCGTACGAAAGTTACGCGGGCAGCCCGGCGAGCCGAGGT 124100 || | || ||| | ||| ||||||||| || | || ||||| | ||| ||| Sbjct 806818 GAGTTGGCCAAACAATATGGCCCGTACGAAACATATGAAGGTAGCCCAGTTAGCAAAGGC 806759 Query 124101 ATTTTGCAGTACGACATGTGGAATGCTACACCGACAAATTTGTGGGACTGGAGCGTTTTA 124160 ||| | || || ||||||||||| || || || || | ||||||||| | | | Sbjct 806758 ATTCTTCAATATGACATGTGGAACAAGACGCCTACTGATCTTTGGGACTGGGCGGCTCTT 806699 Query 124161 AAACAACGCATATCGACGCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGCCGACG 124220 ||| ||| |||| | || ||| |||||||||| |||||||||| ||||| | Sbjct 806698 AAAGAACACATAAAAATTCATGGTGTGCGTAACTCTTTGTTGGTGGCTGCAATGCCTGCA 806639 Query 124221 GCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTTCGAGCCGTTCACT 124271 ||| | ||||||||||| | ||||||||| | || || ||||| | |||| Sbjct 806638 GCATCTGCTGCTCAAATTCTGGGAAACAACCAGTCTTTTGAGCCATACACT 806588 >seq308 Length=190705 Score = 145 bits (160), Expect = 7e-30 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 45128 CAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATC 45187 |||||| ||||| | ||| ||||| ||||| ||||||||||| | || | ||| Sbjct 86636 CAACACAAGATGTAACGTGGATTCTTTTTGAATATTATAATCCGATAATGTGCGACCATC 86695 Query 45188 GTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATC 45247 |||||||||||||| ||| | ||||||||||| ||||| || ||||| || ||||| || Sbjct 86696 TTCCAATTGTTTTCCAGCGAAGATCAATCGTTGTTGGTCGGGTGGAATTCCCTCTTTGTC 86755 Query 45248 TTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGT 45307 ||||| || ||| | ||| | || || || | |||||| || ||||||| || Sbjct 86756 CTGAATCTTGGCTTTCACATTTTCAATAGTATCAGAGGGCTCGACCTCAAGAGTAATGGT 86815 Query 45308 TTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || || |||||||||||||| ||||| Sbjct 86816 CTTGCCCGTAAGGGTTTTTACAAAAATCTGCAT 86848 >seq1 Length=10097680 Score = 134 bits (148), Expect = 1e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTG 45196 ||||| || ||||| || || ||||| ||||| | || ||| |||||||| Sbjct 7547592 ATGCAATGTCGATTCTTTCTGTATATTGTAATCAGACAAAGTCCGCCCATCTTCCAATTG 7547533 Query 45197 TTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTT 45256 ||| || ||| | ||||| |||||||| || || |||||||| ||||| || |||||||| Sbjct 7547532 TTTGCCAGCGAAGATCAAACGTTGCTGATCTGGAGGAATGCCCTCTTTGTCCTGAATTTT 7547473 Query 45257 TTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 |||| ||| | |||||||||| ||| ||||| | ||||| |||||||| || Sbjct 7547472 GGCCTTGACATTTTCAATAGTGTCGGAAGGCTCAACTTCCAAAGTAATTGTTTTGCCAGT 7547413 Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340 |||||||| || ||||||||||| Sbjct 7547412 AAGAGTTTTAACGAAAATTTGCAT 7547389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451993871783960