Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20brevipalpis_20[genbank_20GCA_5F000671755.1_202014-05-08] 1,651 sequences; 315,360,362 total letters Query= NC_013055.1 Length=39896 Score E Sequences producing significant alignments: (Bits) Value seq735 109 1e-19 seq552 102 2e-17 >seq735 Length=2270 Score = 109 bits (120), Expect = 1e-19 Identities = 219/322 (68%), Gaps = 2/322 (1%) Strand=Plus/Minus Query 35326 TCCGATTATTCCGTGGATCGGCGGCAAGCGGCGCCTTG-CAGACCATCTCATTCCGCGCT 35384 |||||| || || ||||| || || ||||| | ||| ||| | || | | || | | Sbjct 1091 TCCGATCATCCCTTGGATTGGTGGAAAGCGTAGACTTATCAGGC-ATATATTGCCACTTT 1033 Query 35385 TTCCGGCGCACGACTGCTACGTTGAAGTGTTCGCGGGCGGCGCTGCGTTGTATTTCATGC 35444 | |||| || | |||||| || || || || ||||| || ||| ||||| Sbjct 1032 TCCCGGAACATGGCTGCTATGTAGAGCCATTTTGTGGTGGCGCAGCCCTGTTTTTCAGTA 973 Query 35445 GGCCGCCGGCAAAGGTCGAGGTGATCAACGACGTTAACGGCGAACTGATCAACCTGTATC 35504 | || |||| || |||||| | || || |||| || || |||| || ||||||| Sbjct 972 AAACACCTTCAAAAGTTGAGGTGCTTAATGATATTAATGGGGAGTTGATAAATCTGTATC 913 Query 35505 GCGTCGTTCAGCATCACCTCGAGGAATTCGTGCGGCAGTTCAAATGGGCGCTCACCAGTC 35564 |||| || |||| || | || || || || || ||||| |||||||| | |||||| Sbjct 912 GCGTGGTAAAGCACCATATGGAAGAGTTTGTCCGACAGTTTAAATGGGCATTAACCAGTA 853 Query 35565 GGCAGGTGTTCGAGTGGCTGAAGCAGACGGCGCCGGAAACGCTCACCGACATCCAGCGTG 35624 | || | || ||||||| | ||| | | || |||| ||||| || || || |||| Sbjct 852 GAAAGCTATTTGAGTGGCAACAAAAGATGCCACCAGAAATTCTCACTGATATTCAACGTG 793 Query 35625 CGGCGCGGTTCTACTATCTGCA 35646 | ||||| || || |||||||| Sbjct 792 CTGCGCGATTTTATTATCTGCA 771 >seq552 Length=31981 Score = 102 bits (112), Expect = 2e-17 Identities = 190/278 (68%), Gaps = 6/278 (2%) Strand=Plus/Minus Query 35609 ACCGACATCCAGCGTGCGGCGCGGTTCTACTATCTGCAGAAAAACTGCTTTGGCGGGATT 35668 ||||| |||||||| ||||| || ||||| || ||||| ||| | || ||||| | Sbjct 9757 ACCGATATCCAGCGCGCGGCCCGTTTCTATTACCTGCAAAAACAGGCGTTCGGCGGCAAG 9698 Query 35669 GTCCACGGGCAGACGTTCGGC---ACGGCTACCACTGCGCCGCCGGGTCTGAACTTGCTG 35725 || | ||| || || ||| ||| | ||||||||||| | | |||||| || || Sbjct 9697 GTGGCGGAGCACACCTTTGGCGTGACGACCACCACTGCGCCAC---GCCTGAACCTGTTG 9641 Query 35726 CGGATCGAGGAAGAATTATCCGCGGCGCACTTGCGCCTCGCGAGCGCATATATCGAGCGT 35785 || || || |||||| | || ||| || |||| | | || | || || | Sbjct 9640 CGCATGGAAGAAGAACTGTCGTTGGCTCATCTGCGATTATCACGCACCACCATTGAACAA 9581 Query 35786 CTGGACTGGGCGGATTGCATCGATCGCTATGACCGGCCGCACACGTTGTTCTATCTCGAT 35845 || || ||||| || || | |||||||||||| ||||| ||| ||||||| |||| Sbjct 9580 CTTGATTGGGCCAGCTGTATTGCTCGCTATGACCGTCCGCATACGCTGTTCTACTGCGAT 9521 Query 35846 CCGCCGTATTTCGAGACGCGCGGCTACGGTGTCGATTT 35883 || ||||||| | || ||||| || |||||||| Sbjct 9520 CCCCCGTATTGGGGCACCGAGGGCTATGGCGTCGATTT 9483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127543099388796