Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20brevipalpis_20[genbank_20GCA_5F000671755.1_202014-05-08] 1,651 sequences; 315,360,362 total letters Query= NC_013597.1 Length=43970 Score E Sequences producing significant alignments: (Bits) Value seq439 118 3e-22 >seq439 Length=76666 Score = 118 bits (130), Expect = 3e-22 Identities = 399/612 (65%), Gaps = 26/612 (4%) Strand=Plus/Plus Query 39321 ATGGCACTGAAAATTATTTCATCAGCACAACCGATCAAGGTTAAAAATATTATTGTTTGT 39380 |||||||| ||||| || | || | ||||| ||| | || ||||| | || ||| Sbjct 25344 ATGGCACTAAAAATAGTTAAAGCATCCCAACCTATCGAAGTAAAAAACCTAATCACCTGT 25403 Query 39381 TTATACGCTCCCCCGGGGGCAGGCAAAACCTCAACCGCATTTACAGCTTCAAGACCATTA 39440 | ||||| || ||||| || ||||| || | || ||||| ||| || | Sbjct 25404 CTTTACGCACCACCGGGATTGGGGAAAACATCCATGGCCTTTACCGCTGATTCTCCTGTG 25463 Query 39441 CTACTCGACTTTGATCACGGATCTTATCGCTCACAATTCCGCAAAGATACCGTGCAGGTT 39500 | |||||||||||| |||| ||||||||||||| || || |||||||| || || | Sbjct 25464 TTGCTCGACTTTGATAACGGTGCTTATCGCTCACAGTTTCGTAAAGATACAGTCCAAATA 25523 Query 39501 GATAGTTGGTCTGATGTAACAAACATTACCGAAGACGACTTAGCAACTTACGACACAATT 39560 | | ||| || || | || |||| | ||||| || |||||| | || || Sbjct 25524 GCCAACTGGAGCGAAATAGAGCAAATCACCGCTGCTGACTTGGCGACTTACAATACCGTT 25583 Query 39561 ATTGTTGATACCGTGGGGCGCGCGCTGGAT--ATTTTAACGGCAGATATTGTTCGGCGTA 39618 | |||||||||| ||| || ||||| ||| | ||| | || || |||| | || | Sbjct 25584 GTGGTTGATACCGCGGGTCGGGCGCTCGATTCACTTT--CTGCCGA-ATTGATACGC-AA 25639 Query 39619 ATGTTAAAGGAACAACGCGCGGCGGTGGTGAGTTAACGCAACAAGGTTACGGCGCACT-A 39677 | | || | ||| | | || || || || | ||| |||| || || | | Sbjct 25640 AAATCCAAAGTTCAA-GGGAATTGGCGGACAGCTATCTTTACAGGGTTTTGGTGCCTTGA 25698 Query 39678 AAACACG-CATTCAGTTCATGGCTAACACAATTGCGCA---GTTTTGGTAAAGATGTTGT 39733 || || | ||||| |||||||| | ||| | |||||||||||| || | Sbjct 25699 AAGCAGGATTTTCAG--GATGGCTAA---ATCTGCTTAAATCATTTGGTAAAGATATTAT 25753 Query 39734 TCTATTGTCTCACATGACAGAACAGCAGCAAAAAGATGAATTCGTAGAACGCTTGGATAT 39793 || | |||||||| |||| ||||| ||| || || || ||||| | ||||| Sbjct 25754 CCTCATAGCTCACATGGAAGAAAAGCAGGTTGGAGAGGATTTAGTTGAACGTCTTGATAT 25813 Query 39794 ACAAGGTAGCTCAAAAACGGAAATTTACAAAGTGGCGGATTTGATGGGGCGATTGCGCTT 39853 ||||| |||| ||| || ||||||||||| || || | ||||| ||| | ||| | Sbjct 25814 TCAAGGCGGCTCTAAAGGTGAGATTTACAAAGTCGCCGACGTTATGGGTCGAATCCGCAT 25873 Query 39854 TGATGACACA---------AACAAAAGAGTTTTGGATTTTAACCCAAGCTCTACCGGGTT 39904 ||| | | || | |||||| | | || ||||| || ||| | |||| || Sbjct 25874 TGAAGGCTCAGGCCAGAATACAAAAAGATTGCTCGACTTTAATCCCAGCGCCTCCGGCTT 25933 Query 39905 CGGTAAAAATCC 39916 ||| |||||||| Sbjct 25934 CGGCAAAAATCC 25945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 140579643794184