Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20brevipalpis_20[genbank_20GCA_5F000671755.1_202014-05-08] 1,651 sequences; 315,360,362 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq316 98.7 1e-15 >seq316 Length=231415 Score = 98.7 bits (108), Expect = 1e-15 Identities = 337/514 (66%), Gaps = 10/514 (2%) Strand=Plus/Minus Query 159271 TGTGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAG 159330 ||||| ||||| || | |||| |||||||| ||||| || | || | || ||||| Sbjct 111577 TGTGAAATCACTGGTTATGATAAAATATCATTTCAACCGAATTCTGGGGCTCAAGGTGAA 111518 Query 159331 TATGCAGGACTGTTAGCAATCCA-AGCATACCATCAAGGATCAGGA-GATGATAAAAGAA 159388 || || || || ||| || | ||| || ||| | | ||| | || | | ||| Sbjct 111517 TACGCTGGCCTAAGAGCGATTCGCAGC-TATCATGA-GCATCGTAATGAAGGACACCGAA 111460 Query 159389 ATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAG 159448 |||||||||| || || || |||||||| || ||||| || || || ||||| | Sbjct 111459 ATGTATGTTTAATTCCGATTTCTGCACATGGTACAAATCCCGCTTCTGCTCAAATGGCTG 111400 Query 159449 GGATGAAAGTTGTAGGTGTCAAGTGTGATGA-TGATGGCAACATAGACATCAAAGATCTA 159507 | |||||||| | | | | || | | |||||| | ||||| || ||||| Sbjct 111399 GCATGAAAGTCGAACCCAT-ACGTTTACTTTCTGATGGAAGTATAGATATGGCGCATCTA 111341 Query 159508 GAGAAGAAAGCAATCATGA--ATACATTTGAACTGTCATGTATTATGATTACATATCCAT 159565 | |||||| || ||| || | | || || ||| | ||| |||||||||| | Sbjct 111340 CGCGATAAAGCA-TC-TGAGCATGCGCGCAATCTCTCCTGTGTAATGGTTACATATCCCT 111283 Query 159566 CTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGATTGTTCATGAGAATG 159625 | || || || |||||| || || | | |||| || | | | ||| | | Sbjct 111282 CAACTATGGGCGTTTTTGAAGAAACAATTACAGAGATTTGCGATCTAATACATCGCCACG 111223 Query 159626 GTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCAT 159685 | || || || || || || ||||| ||| | |||||||| |||||| || || Sbjct 111222 GCGGACAAGTGTACCTGGACGGTGCCAATATGAATGCACAAGTAGGTTTATGCCGTCCTG 111163 Query 159686 GTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATG 159745 | || ||||| ||||| | ||| | || || ||||| ||||| || || || |||| Sbjct 111162 GAGATTATGGAAGCGATGTCTCTCACTTGAATTTGCATAAAACATTTTGCATACCTCATG 111103 Query 159746 GAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 | ||||| || || ||| | || ||||||||||| Sbjct 111102 GCGGTGGCGGACCCGGCATGGGACCTATTGGTGT 111069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588039064093360