Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20brevipalpis_20[genbank_20GCA_5F000671755.1_202014-05-08] 1,651 sequences; 315,360,362 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq148 416 3e-111 seq240 354 9e-93 seq184 315 8e-81 seq89 154 2e-32 >seq148 Length=545759 Score = 416 bits (460), Expect = 3e-111 Identities = 1442/2235 (65%), Gaps = 69/2235 (3%) Strand=Plus/Minus Query 46973 TTTTTCCACAGTAAACTTAATTGGATTACTCGCTGATTTTGTTCGTAAATAATACATACC 47032 ||| || || ||||| | || ||||| |||| ||||| | || |||||||||||| Sbjct 221667 TTTATCGACTGTAAATTGTATGGGATTGGATGCTGGCTTTGTCCTTAGATAATACATACC 221608 Query 47033 AGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGG 47092 ||| || ||||| |||||||||| |||||||| | |||||| |||||||| Sbjct 221607 AGTTTTCAAACCCGCTTTCCATCCATAAAAATGCATGGAGGACAATTTACCATAACTAGC 221548 Query 47093 TTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGC 47152 || | ||||| | |||| ||||| || ||||| || || || || | ||| | || Sbjct 221547 GTCAGCCATATGTACGTTAAACGATTGGCTTTGATCGATGAAAGCGCCGCGATCGACAGC 221488 Query 47153 CATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGTTTTATAAATTTGTTTAATGTC 47212 ||| || | | | | ||| || ||||| ||||||||||| | || ||| ||||| Sbjct 221487 CATGTCAATTGTTGACTTCAGTGAAATTTCCCAAACTGTTTTATATAATTCTTTTATGTC 221428 Query 47213 TTCTGGGA--GATTAG-TATTTTGAATAGATCCTCCgttttct-ataattttgtttttta 47268 || || | | || | | ||||| || || || | | | | ||||| |||||| | Sbjct 221427 TTTAGGTATGGCTTCGATTTTTTGTATTGAACCACGATGTGCCCATAATAA-GTTTTTCA 221369 Query 47269 attc---atttgaccaaagttttcgttcagttaatgtttttaaAAGATGAGGATTAACAA 47325 || ||| |||||| || || || || ||| | | |||| |||| || | Sbjct 221368 TGTCGCCATT---CCAAAGATTCAACTCCGTCAAATCTTTAAGCAAATGATGATTGACCA 221312 Query 47326 TT-TGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATA 47384 |||||| | ||||||| ||| | || |||| | || ||||| || || | Sbjct 221311 CAATGAAAT-CACCAGATAATACACGTCGTGTATAAACGTTTGAAGTATACGGCTCAAAG 221253 Query 47385 GATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAG 47444 ||||| || || |||| |||||||||||| ||||| |||||||| | || || || || Sbjct 221252 GATTCGTTGTTGCCAAGAATTTGAGCAGTAGATGCCGTAGGCATTGGGGCCACCAACAAA 221193 Query 47445 CTATTTCTTACTCCAT-ATTTTTGTATCTNNNNNNNNNNNNGTTTCCAATCCCAAAGATC 47503 ||| | || |||| ||||||| || | ||||||||||||||| Sbjct 221192 GAATTACGCACACCATGATTTTTG-ATGTCATCTTTAAGAGCCGCCCAATCCCAAAGATC 221134 Query 47504 TGATGGAACAACATTCCAAAAATCATATTGAAGAATTCCTTTACTTATCGGAGAACCATT 47563 | || ||||| | |||||||||||||| ||||| || | || ||| | Sbjct 221133 AGTAGGCTTCTTGTTCCACATGTCATATTGAAGAATACCTTTGCTAACTGGGCTACCTTC 221074 Query 47564 ATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTGCTTCCAATGCACTATA 47623 |||||||| || || || ||| |||| || | ||||| || || || || |||| || Sbjct 221073 ATATGTTTCGTACGGGCCATATTGTTTGGCCAACTCACAGCTAGCCTCTAAAGCACCGTA 221014 Query 47624 ATATATTGTTTCAAATATTTTTATGTTTAGATTCCTTGCTTCTGATGATTCAAAAGGATA 47683 |||||| ||||| || |||| | |||| || | | |||| | ||||| Sbjct 221013 ATATATGGTTTCGAAAATTTGTTGATTTAATAGAACAGCATTTTCGCTTTCATATGGATA 220954 Query 47684 NNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATACCAATTGGTCTATGAGT 47743 |||| || || |||||||| || || ||||||||||| | ||| Sbjct 220953 ACGCATTAAAATTAATGCGTCAGCAAATCCTTGGACGCCTATACCAATTGGACGGTGACG 220894 Query 47744 TTTATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATATCTATAATTTTATTTAG 47803 |||||| | ||||| || || ||||| | ||| || || || ||||| || || Sbjct 220893 CAAATTAGATCTTTTGGCTTCCGGCAACGGATAATAGTTAATGTCAATTATTTTGTTGAG 220834 Query 47804 ANNNNNNNNNNNNNNNNNNACAATTTCTCTTAATTTATTAAAATCAAACTTGTTATTTAT 47863 || |||| | ||||| |||||||| | || |||| | Sbjct 220833 GTTCCTTGTTATAAGCTTCGTAACTTCTTTCAATTTGTTAAAATCGTATTTTTTATCCGT 220774 Query 47864 A---ACAAACCTATTAAGTGCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATT 47920 | || ||| | || | ||| || || || || || || || || | |||| | Sbjct 220773 AGTCACGAACATGTTTAATGCAATCGAGGCCAGGTTGCAAACTGCAATTTCATCAGCCGA 220714 Query 47921 AGTATATTGTATTATTTCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATG 47980 ||| |||| | ||||| | ||| | |||| | |||| |||||||| | || || || Sbjct 220713 AGTGTATTCGACAATTTCTGTACACAAGTTACTAGATTTTATAGTACCAATGTTCTGTTG 220654 Query 47981 ATTATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTG 48040 |||| | || || || || |||||||||||| |||| |||||||| || || Sbjct 220653 ATTACTCTTGCGATTGCAAGCATCTTTGTAAAGCATATAAGGAGTTCCAGTCTCCGCTTG 220594 Query 48041 AGATTCAATG-ATAGATTTCCAAAC----AGTC-CTAGCCTTTATAACAGCTCTAGCTTT 48094 ||| | || ||| || ||||| || | | ||| || || | ||||| Sbjct 220593 AGACT---TGCATA---TTGCAAACCACAAGGCACGAGCTTTAATTGTTTGATTCGCTTT 220540 Query 48095 ATTATCATGTTCGTATTTAGTATATAACTTCTCAAATTCATCCCCATACACATTATCTAA 48154 ||| ||||||||| | ||||| || ||||||||||| || | || | | || Sbjct 220539 GCCCTCACTTTCGTATTTCATGTATAATTTGTCAAATTCATCTCCCCAAACTTCACACAA 220480 Query 48155 CCCAGGACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCAT 48214 |||||||||| || ||||||||| | |||||||| |||||| | |||||| |||| Sbjct 220479 ACCAGGACATTTATGAGGACACATTAGAGACCAATCGCCATCATCCTCTACTCTTTTCAT 220420 Query 48215 AAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCC 48274 || | ||| |||||||| || || ||| ||||| | | || || || | || Sbjct 220419 GAACAGATCCGGTATCCATAGGGCATAAAACAAATCGCGTGCTCGATCTTTCTCCTCACC 220360 Query 48275 ACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATAT 48334 | |||| |||| | || ||||| || | | ||| || ||||| || || || || || Sbjct 220359 AAAATTCTTTTTCAAATCTAGAAATTCGAAAACATCTGCGTGCCAAGGCTCCAAGTACAT 220300 Query 48335 TGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATA 48394 || | ||||||| ||||| ||| || ||||||| ||| | |||| | ||||| | Sbjct 220299 AGCAAAAGCACCTGGACGTTTTCCACCACCCTGATCTACATAACGGGCAACACTGTTAAA 220240 Query 48395 AACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCC 48454 | | ||||| || |||| ||||| |||| | || || || | || | | || Sbjct 220239 CAGACGCAACATAGGAACAAGACCATCCGATACATCACCAGTGCCTGCTATCTTCGTCCC 220180 Query 48455 ACTAGCTCTTA--TATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGA 48512 | |||| | | | ||| || |||||| || || || || || ||| | Sbjct 220179 TTTTGCTCGCACGCAATGAACATTTAA--ACCTATCCCCCCGGCTGACTTGGAAATTTTA 220122 Query 48513 GCACA-CCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAG 48571 ||||| || || | ||| |||| |||| | || || || ||| | Sbjct 220121 GCACATTGGTCTACAGCCTTCA-AAATACCTTTCAAGGAGTCTTCAGGGATCGTTAGCAA 220063 Query 48572 AAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATG 48631 |||||| |||| ||| ||| | |||| | | | |||||| ||||| | ||||| Sbjct 220062 GAAACAAGATGACAATTGTGGACGTATAGTTGCAGCACCAAATAAAGTTGGCGTAGCATG 220003 Query 48632 AATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATC-CCATT 48690 | |||| | ||| || | | ||||||||||||||| ||| || || || || Sbjct 220002 AGTAAAATAGCGCTCCGACATAAGATTATATGTTTCAATAGCAGCCTCAATGTCATCACC 219943 Query 48691 GATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAATTTTGTTAT 48750 | || ||||| || | |||||||||| ||||| ||| || | || ||||||| || Sbjct 219942 G-TGAATACCAATGGCGACACGCATTAGCATATGTTGCGGCCGCTCCGCAATTTTACCAT 219884 Query 48751 TTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTATGAAAAGT 48810 || || || | ||| ||| ||||| ||||||||||||||| | ||||| |||| Sbjct 219883 CAATCTTTAACAAATAAGATCGTTCCAGAGTTTTAAAACCAAAAAAATTGTAATTGAAGT 219824 Query 48811 CGTTATCATTAATAATTGATGAATTTATTCTTT---CCTTATGTTTATATACTACA-TCC 48866 | ||||| ||||| | ||||||| || | | || | | | |||| ||| | Sbjct 219823 CCCGATCATATATAATGGCCGAATTTAATCGATCAGCATTCTCTCT-TATA--ACATTGT 219767 Query 48867 ATTACATTTTTTGATATAAT---------TGATTCCTT------GTAA------AGATCT 48905 | | | || ||||||||| || || || || | ||||| Sbjct 219766 AATGGA-ATTCTGATATAATGGGCGACGGGGAATCATTATCTACGTTATGATGTAGATCA 219708 Query 48906 TCTACAACATCACTAAATAttttttttGTTTCTTTATGAAGATTAGATATAGATATTCTA 48965 | ||| ||| || | ||| |||||||||||||| | ||| |||| | |||| | Sbjct 219707 CTCATAACTTCAGAGAACACTTTCTTTGTTTCTTTATGTAAATTTGATACCGCAATTCGA 219648 Query 48966 GCAGCTAATATAGCATAATCTGGATGAATTGTTGTACATGTA-CTAGATATTTCTGCTGC 49024 || ||||| ||||||||||| ||||| || | || | || | | ||||| || || Sbjct 219647 GCGGCTAAAATAGCATAATCCGGATG-ATCGATGGTCTTGCAGGCGGCAATTTCGGCCGC 219589 Query 49025 TAATATATCTAATTCTTTAGTAGTTACACCTGTATATATTCCTTGAATAACTTTCATTGC 49084 | |||| | ||||| ||||| ||||| | || | ||| | || ||| |||| | Sbjct 219588 CAGATTATCAAGTTCTTGCGTAGTCACACCGGCGTACAATCCGTTAACAACCTTCAAAGT 219529 Query 49085 TATATTTACTGGATCTATATGATCCATATCCAGTCCATAACATAAtttttttATTCTAGA 49144 || ||||||||| |||||||| || |||||||| | |||| ||||| || Sbjct 219528 AATGGCGGCTGGATCTACGAAATCCATATGAAGACCATAACACAGCTTTTGAATTCTTGA 219469 Query 49145 TGTAATTTTATCAAA 49159 | ||||||||||| Sbjct 219468 CATGATTTTATCAAA 219454 >seq240 Length=301270 Score = 354 bits (392), Expect = 9e-93 Identities = 1407/2202 (64%), Gaps = 77/2202 (3%) Strand=Plus/Minus Query 47010 TTTGTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATA 47069 ||||||| || |||||||||||||| || |||||| |||| ||||| ||||| ||| Sbjct 294584 TTTGTTCTTAGGTAATACATACCAGTTTTCAAACCTGCTTTCCACCCATAAAAATGAATA 294525 Query 47070 CTAGTTAATTTAGAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCA 47129 || |||||| |||||| ||||| | | || ||||||| |||||||| || || Sbjct 294524 GAAGACAATTTACCATAACTTGGTTCAGCTACGTGTATATTAAATGATTGACTTTGGTCG 294465 Query 47130 ATAAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACT 47189 || || ||||| | ||| | ||||| | | | | | || || ||||| ||| Sbjct 294464 ATGAAGGCACCGCGATCGACAGCCATGTTAATGGTTGACTTCACTGAAATTTCCCAAACT 294405 Query 47190 GTTTTATAAATTTGTTTAATGTCTTCTGGGAGA---TTAGTATTTTGAATAGATCCTCCg 47246 |||||||| | || | | |||| ||| || | | || | ||||| || || || | Sbjct 294404 GTTTTATATAATTCTCTTATGTGTTCAGGTATAGCTTTGATTTTTTGTATTGAACCACGA 294345 Query 47247 ttttctataattttgttttttaattcatttgaccaaagttttcgttcagttaatgttttt 47306 ||| | | | |||||| | ||| | |||||| || || || || || Sbjct 294344 TTTGACAGTAATAAGTTTTTCATTTCGTCATTCCAAAGATTCAACTCCGTCAAATCTTGA 294285 Query 47307 aaAAGATGAGGATTAACAATTTGAAATTCTCCAGAT--AGTACTCTACGGCTATATATAT 47364 | | |||| |||| || | || || |||||| |||| | | | | | || | | Sbjct 294284 AGCAAATGATGATTGACCACCATGAACTCACCAGATGAAGTA-TGTTCTG-TGTAAACGT 294227 Query 47365 TACTTGTATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAG 47424 | || ||||| || | ||| | || ||||| | ||||||||||| ||||||| || Sbjct 294226 TTGAAGTGTATGGCTCAAAAGACTGGTTGTTTCCCAGAATTTGAGCAGCAGATGCTGCAG 294167 Query 47425 GCATGGATGCAACTAATAAGCTATTTCTTACTCCAT--ATTTTTGTATCTNNNNNNNNNN 47482 |||| | || || || || || | || |||| |||||| | | | Sbjct 294166 GCATTGCAGCCACCAACAAAGAGTTACGCACACCATGAATTTTTATGTGTTCTTTAAGAG 294107 Query 47483 NNGTTTCCAATCCCAAAGATCTGATGGAACAACATTCCAAAAATCATATTGAAGAATTCC 47542 | ||| ||||||||||| | || ||||| | |||||||||||||| || Sbjct 294106 CCGC--CCAGTCCCAAAGATCAGTAGGCGTCTTGTTCCACATGTCATATTGAAGAATGCC 294049 Query 47543 TTTACTTATCGGAGAACCATTATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACA 47602 ||| || | || ||| | |||||||| || || || ||| |||| || | ||||| Sbjct 294048 TTTGCTAACTGGGCTACCTTCATATGTTTCGTACGGGCCATATTGTTTGGCCAACTCACA 293989 Query 47603 ACTTGCTTCCAATGCACTATAATATATTGTTTCAAATATTTTTATGTTTAGATTCCTTGC 47662 || || || || |||| |||||||| ||||| || |||| | |||| || Sbjct 293988 GCTAGCCTCTAACGCACCGTAATATATAGTTTCGAAAATTTGTTGATTTAATAGAACAGC 293929 Query 47663 TTCTGATGATTCAAAAGGATANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACACC 47722 | | || | ||||| || | || || |||||||| ||||| Sbjct 293928 ATTTTCGCTCTCGTATGGATAACGCATTAAAATTAACGCGTCAGCAAATCCTTGGACACC 293869 Query 47723 AATACCAATTGGTCTATGAGTTTTATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTT 47782 ||| |||| || | ||| ||||||| | | ||| || | ||||| | ||| Sbjct 293868 TATAGCAATCGGACGGTGACGCATATTAGATTTTTTGGTTTCCGGCAGCGGATAGTAGTT 293809 Query 47783 TATATCTATAATTTTATTTAGANNNNNNNNNNNNNNNNNNACAATTTCTCTTAATTTATT 47842 || || || ||||| || || || |||| | ||||| | Sbjct 293808 AATGTCAATTATTTTGTTGAGGTTCTTTGTTATAAGCTTTGTAACTTCTTTCAATTTGTA 293749 Query 47843 AAAATCAAACTTGTTATT---TA-TAACAAACCTATTAAGTGCTATAGATGCTAGATTAC 47898 |||||| | ||||| | || | || ||| | || || || || || || || || | Sbjct 293748 AAAATCGTA-TTGTTTCTCCGTAGTCACGAACATGTTTAGCGCAATTGAGGCCAGGTTGC 293690 Query 47899 ATACAGCTACCTCATTTG--GATTAGTATATTGTATTATTTCAGCACATAGATTACCACA 47956 | || || | |||| ||| ||||||| | ||||| | || | |||| ||| Sbjct 293689 AAACTGCAATTTCATCAACTGAT--GTATATTCGACAATTTCTGTACTAAAGTTACTACA 293632 Query 47957 TTTGATAGTACCCAAATT---TTGATGATTATTNNNNTTGTTACATGCGTCCTTGTAAAG 48013 ||| || ||||| | || ||||| | || ||| || || || |||||||| Sbjct 293631 TTTTATTGTACCAATGTTCCCTTGATTGCTTTTGCGATTG---CAAGCATCTTTGTAAAG 293575 Query 48014 CATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACA----GTCC 48069 |||| |||| | |||||| ||| |||| || || || ||| | || || | | Sbjct 293574 CATATAAGGAGCTCCAGTCTCTTCTTGAG---CACTG-TATATTGCGAACCACAAGGCAC 293519 Query 48070 TAGCCTTTATAACAGCTCTA---GCTTTATTATCATGTTCGTATTTAGTATATAACTTCT 48126 ||| || || | | || ||||| ||| ||||||||| | ||||| || | Sbjct 293518 GAGCTTTAATT---GTTTTATTCGCTTTGCCCTCACTTTCGTATTTCATGTATAATTTGT 293462 Query 48127 CAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGACC 48186 ||||||||| || | || | | || ||||| |||| || ||||||||| | |||| Sbjct 293461 CAAATTCATGTCCCCAAACTTCACACAAACCAGGGCATTTATGAGGACACATTAGAGACC 293402 Query 48187 AATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAA-T 48245 |||| ||||| | |||||| |||| || | ||| |||||||| || || |||| | Sbjct 293401 AATCGCCATCAGCCTCTACTCTTTTCATGAAAAGATCCGGTATCCATAGGGC-ATAATGT 293343 Query 48246 AAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATT 48305 ||||| | | | ||| || || ||| ||| |||||| | | ||||| || | Sbjct 293342 AAATCACGTGGACGGTTTTCCTCCTTACCAGTATCCCTTTTCAAATTTAGAAATTCGAAA 293283 Query 48306 ATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCT 48365 ||||| |||||||| || || || ||||| || | ||||| | ||||| | || || Sbjct 293282 ATATCTGCATGCCAAGGCTCCAAGTATATAGCAAGAGCACCTTGACGTTTTCTCCCGTCT 293223 Query 48366 TGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGAT 48425 |||| || ||| | ||| |||||| | || || ||||| ||||||| |||| | ||| Sbjct 293222 TGATGTACATAACAGGCGAGATTGTTGAACACGCTCAACATAGGGACAAGACCACTCGAT 293163 Query 48426 ATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTAT--ATTACTAATTGAAATAC 48483 ||||| || || || || | | || | |||| ||| | | ||| | | Sbjct 293162 GCGCCATTAGTACCTGATATCTTTGTACCTTTTGCTCGTATGCAGTGGATATTTAGAG-- 293105 Query 48484 CTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTT 48543 ||| ||||||| | ||||| | |||||| | | | || | | |||| || | Sbjct 293104 CTACCCCACCTGTCGACTTAGAAACGGCAGCACATTGATATACGGCCTTAAAAATACCAT 293045 Query 48544 CTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTC 48603 | || ||| ||| ||| ||| || ||| | |||| ||||||| || | | Sbjct 293044 CAATGGAATCTTCTGGCATCGTTAGTAAGAAATATGATGACAATTGCGGACGAACAATAG 292985 Query 48604 CTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATG 48663 | | | |||||| |||| || |||||| |||| | | ||| || | | ||||||| Sbjct 292984 CAGCAGCAAATAAAGTTGACGAAGCATGACTAAAATAATGCTCAGACATAAGATTATATG 292925 Query 48664 TTTCAATAACAGAATCTATATCC-CATTGATGTATACCTATAGATACACGCATTAACATA 48722 |||||||| ||| || || || || | || ||||| || | |||||||||| |||| Sbjct 292924 TTTCAATAGCAGCGTCAATCTCATCACCG-TGAATACCAATGGCGACACGCATTAGCATA 292866 Query 48723 TATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTT 48782 | ||| || | || |||||||| ||| |||||| | | ||| |||| |||| ||| Sbjct 292865 TGTTGTGGCCGCTCCACAATTTTACCATTAATTTTCCACAAATAAGATTCCTCCAGAGTT 292806 Query 48783 TTAAAACCAAAATAGTTGTATGAAAAGTCGTTATCATTAATAATTGATGAATTTATTCTT 48842 |||||||||||| | |||| ||||| ||| | ||||| | ||||||| || Sbjct 292805 TTAAAACCAAAAAAAGTGTAATTGAAGTCCCGATCGTGTATAATGGCCGAATTTAATCGA 292746 Query 48843 TCCTTATGTTTATATACTACA-TCCATTACATTTTTTGATATAATTGATTCCTTGTAAAG 48901 || || || | || ||| | | | | || |||| || | | | || Sbjct 292745 TCAGCATTGTTTTTTATAACATTGTAATGGA-ATTCCGATACTATGGGCGACGGGGAACC 292687 Query 48902 ATCTTCTAC---------------------AACATCACTAAATAttttttttGTTTCTTT 48940 ||| ||||| ||| || ||| ||||| ||||||||||| Sbjct 292686 ATCATCTACGTTATGATGTAGGTCACTCATAACCTCGGAAAACATTTTCTTTGTTTCTTT 292627 Query 48941 ATGAAGATTAGATATAGATATTCTAGCAGCTAATATAGCATAATCTGGATGAATTGTTGT 49000 ||| | ||| |||| | |||| ||||||||| ||||||||||| ||||| || | || Sbjct 292626 ATGTAAATTTGATACCGCAATTCGAGCAGCTAAAATAGCATAATCCGGATG-ATCGGTGG 292568 Query 49001 ACAT--GTACTAGATATTTCTGCTGCTAATATATCTAATTCTTTAGTAGTTACACCTGTA 49058 ||| | || | ||| || |||| |||| ||||||| ||||||||||| Sbjct 292567 TCATGCGGAC-CGCGGTTTTAGCAGCTAGATTATCCAATTCTTGCGTAGTTACACCGCGG 292509 Query 49059 TATATTCC-TTGAATAACTTTCATTGCTATATTTACTGGATCTATATGATCCATATCCAG 49117 | | || || | ||||||| | || ||||||| |||||||| || Sbjct 292508 TGCAAGCCGCTGGCT-ACTTTCAAAGTAATGGCGGTCGGATCTACGAAATCCATATTAAG 292450 Query 49118 TCCATAACATAAtttttttATTCTAGATGTAATTTTATCAAA 49159 |||||||| |||||| |||||||| || |||||||| || Sbjct 292449 ACCATAACACAATTTTAGGATTCTAGAAGTGATTTTATCGAA 292408 Score = 150 bits (166), Expect = 2e-31 Identities = 351/523 (67%), Gaps = 22/523 (4%) Strand=Plus/Plus Query 47922 GTATATTGTATTATTTCAGCACATAGATTACCACATTTGATAGTACCCAAATT---TTGA 47978 ||||||| | ||||| | || | |||| |||||| || ||||| | || |||| Sbjct 290864 GTATATTCGACAATTTCTGTACTAAAGTTACTACATTTTATTGTACCAATGTTCCCTTGA 290923 Query 47979 TGATTATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATC 48038 | | || ||| || || || |||||||||||| |||| | |||||| | | Sbjct 290924 TTGCTTTTGCGATTG---CAAGCATCTTTGTAAAGCATATAAGGAGCTCCAGTCTTTTCT 290980 Query 48039 TGAGATTCAATGATAGATTTCCAAACA----GTCCTAGCCTTTATAACAGCTCTA---GC 48091 |||| || || || ||| | || || | | ||| || || | | || || Sbjct 290981 TGAG---CACTG-TATATTGCGAACCACAAGGCACGAGCTTTAATT---GTTTTATTCGC 291033 Query 48092 TTTATTATCATGTTCGTATTTAGTATATAACTTCTCAAATTCATCCCCATACACATTATC 48151 ||| ||| ||||||||| | ||||| || ||||||||||| || | || | | Sbjct 291034 TTTGCCCTCACTTTCGTATTTCATGTATAATTTGTCAAATTCATCTCCCCAAACTTCACA 291093 Query 48152 TAACCCAGGACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGT 48211 || ||||| |||| || ||||||||| | |||||||| ||||| | |||||| | Sbjct 291094 CAAACCAGGGCATTTATGAGGACACATTAGAGACCAATCGCCATCAGCCTCTACTCTTTT 291153 Query 48212 CATAAATATATCTGGTATCCAAAGAGCTATAA-ATAAATCCCTAGTTCTTAGTTCTTCAT 48270 ||| || | ||| |||||||| || || |||| |||||| | | | ||| || | Sbjct 291154 CATGAAAAGATCCGGTATCCATAGGGC-ATAATGTAAATCACGTGCACGGTTTTCCTCCT 291212 Query 48271 TGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAAT 48330 | ||| ||| |||||| | | ||||| || | ||||| |||||||| || || || | Sbjct 291213 TACCAGTATCCCTTTTCAAATTTAGAAATTCGAAAATATCTGCATGCCAAGGCTCCAAGT 291272 Query 48331 ATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGT 48390 |||| || | ||||| | ||||| | || |||||| || ||| | ||| ||||| Sbjct 291273 ATATAGCAAGAGCACCTTGACGTTTTCTCCCGTCTTGATGTACATAACAGGCGAGATTGT 291332 Query 48391 TATAAACTCTTAACATTGGGACAATACCATTTGATATACCATT 48433 | | || || || || || |||| |||||| ||| ||||| Sbjct 291333 TGAACACGCTCAATATAGGAACAAGACCATTCGATGCGCCATT 291375 >seq184 Length=525875 Score = 315 bits (348), Expect = 8e-81 Identities = 509/726 (70%), Gaps = 11/726 (2%) Strand=Plus/Minus Query 18773 ATCCTAATTCTAATAGTAGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCAC 18832 |||| ||||||||||| | | |||||||||| ||| || ||| ||| | ||| Sbjct 28987 ATCC-AATTCTAATAGCAAACGATCCGCTACATATTCTATGTATTGACACATACTTTCAT 28929 Query 18833 AATTCATTCCTATTAATTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTA 18892 |||||| || ||||| || || ||||| || ||||| |||||||| | ||| || || | Sbjct 28928 TATTCATACCGATTAAATTGACTGGTAGAGCTTCTGTCAGAAATTCCTTTTCAATTTTAA 28869 Query 18893 CTGCCTCTGATATAATAGATACAACTCTATCTTCATTAGGAGGGTATAGAAG---ATGTT 18949 | || || | ||| || | ||| | | ||| || | || | | | | || || Sbjct 28868 CGGCATCGGTTATTATT--TCCAA-TATGCGTTCTTTGGTCGGTTTTTGTATCAAATATT 28812 Query 18950 TAAACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAG 19009 ||||||| ||| ||||| || ||||||| || || || | ||| |||||||||| Sbjct 28811 TAAACATTAAAACCGCAAATTCGCAATGTAAACCTTCATCGCGTGATATTAATTCATTAG 28752 Query 19010 AAAATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATC 19069 ||||||||| ||| ||||| | ||| | ||| || | ||| ||||| |||||||| || Sbjct 28751 AAAATGTTAGACCCGGCATTATTCCACGTTTCTTAAGCCAAAATATCGAAGCAAAACTTC 28692 Query 19070 CAGAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGC-- 19127 || ||||||||||||||| || || |||||||| | | | || ||| || | || Sbjct 28691 CACTAAAGAATATACCTTCGACGGCAGCAAAAGCTATGACACGCTCACCAAAATTCGCCG 28632 Query 19128 ATCATTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGT 19187 | | || || ||||| | ||||| || || |||||||| || | ||||| || Sbjct 28631 AACGCGATGAT--ATCCAAGCTAAAGCCCATTCCGCTTTCTTTTTAACTAACGGCATCGT 28574 Query 19188 CTCTATAGAATTAAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAA 19247 ||| || | |||||| ||||| || || | | |||| | | ||| || || | Sbjct 28573 CTCAATGGCATTAAAAAGATAATCGCGTTCTTTCGGATCTGCGATAAATGTTTCAATAAG 28514 Query 19248 TAAACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCT 19307 |||||| |||||||| || || | |||||| || || || ||||| || ||||| || | Sbjct 28513 TAAACTATACATTTCCGAGTGTACATTTTCGATGGCTATTTGAAAACCATAAAAGCAACG 28454 Query 19308 TGCTTCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCC 19367 ||||| |||| || ||||| | |||| | ||| || ||||| |||||||| || || Sbjct 28453 AGCTTCGGTTACTTGAACTTCTTGAGAAAAACGTTCCACTAAATTCTCATTAACAATGCC 28394 Query 19368 ATCACTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAA 19427 ||| || |||||||| || || |||||| ||||||||| |||||| ||||| Sbjct 28393 GTCAGATGCCGCAAAAAAAGCCAAAACATGTGAAATAAAATGACGTTCATCATCAGTTAA 28334 Query 19428 TGTATTCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGC 19487 | | ||||| || || |||| || | ||| || ||||| | |||||||||||||| Sbjct 28333 TCGCTCCCAATGATCAAGATCTGCAGCGAGATCAACCTCTTCCGCCGTCCAAAAAGAAGC 28274 Query 19488 CTCTGC 19493 || || Sbjct 28273 TTCAGC 28268 >seq89 Length=807233 Score = 154 bits (170), Expect = 2e-32 Identities = 420/641 (66%), Gaps = 11/641 (2%) Strand=Plus/Plus Query 47010 TTTGTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATA 47069 ||||||| || |||||||||||||| || |||||| |||| ||||| ||||| ||| Sbjct 806226 TTTGTTCTTAGGTAATACATACCAGTTTTCAAACCTGCTTTCCACCCATAAAAATGAATA 806285 Query 47070 CTAGTTAATTTAGAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCA 47129 || |||||| |||||| ||||| | | || ||||||| |||||||| || || Sbjct 806286 GAAGACAATTTACCATAACTTGGTTCAGCTACGTGTATATTAAATGATTGACTTTGGTCG 806345 Query 47130 ATAAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACT 47189 || || ||||| | ||| | ||||| | | | | | || || ||||| ||| Sbjct 806346 ATGAAGGCACCGCGATCGACAGCCATGTTAATGGTTGACTTCACTGAAATTTCCCAAACT 806405 Query 47190 GTTTTATAAATTTGTTTAATGTCTTCTGGGAGA---TTAGTATTTTGAATAGATCCTCCg 47246 |||||||| | || | | |||| ||| || | | || | ||||| || || || | Sbjct 806406 GTTTTATATAATTCTCTTATGTGTTCAGGTATAGCTTTGATTTTTTGTATTGAACCACGA 806465 Query 47247 ttttctataattttgttttttaattcatttgaccaaagttttcgttcagttaatgttttt 47306 ||| | | | |||||| | ||| | |||||| || || || || || Sbjct 806466 TTTGACAGTAATAAGTTTTTCATTTCGTCATTCCAAAGATTCAACTCCGTCAAATCTTGA 806525 Query 47307 aaAAGATGAGGATTAACAATTTGAAATTCTCCAGAT--AGTACTCTACGGCTATATATAT 47364 | | |||| |||| || | || || |||||| |||| | | | | | || | | Sbjct 806526 AGCAAATGATGATTGACCACCATGAACTCACCAGATGAAGTA-TGTTCTG-TGTAAACGT 806583 Query 47365 TACTTGTATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAG 47424 | || ||||| || | ||| | || ||||| | ||||||||||| ||||||| || Sbjct 806584 TTGAAGTGTATGGCTCAAAAGACTGGTTGTTTCCCAGAATTTGAGCAGCAGATGCTGCAG 806643 Query 47425 GCATGGATGCAACTAATAAGCTATTTCTTACTCCAT--ATTTTTGTATCTNNNNNNNNNN 47482 |||| | || || || || || | || |||| |||||| | | | Sbjct 806644 GCATTGCAGCCACCAACAAAGAGTTACGCACACCATGAATTTTTATGTGTTCTTTAAGAG 806703 Query 47483 NNGTTTCCAATCCCAAAGATCTGATGGAACAACATTCCAAAAATCATATTGAAGAATTCC 47542 | ||| ||||||||||| | || ||||| | |||||||||||||| || Sbjct 806704 CCG--CCCAGTCCCAAAGATCAGTAGGCGTCTTGTTCCACATGTCATATTGAAGAATGCC 806761 Query 47543 TTTACTTATCGGAGAACCATTATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACA 47602 ||| || | || ||| | |||||||| || || || ||| |||| || | ||||| Sbjct 806762 TTTGCTAACTGGGCTACCTTCATATGTTTCGTACGGGCCATATTGTTTGGCCAACTCACA 806821 Query 47603 ACTTGCTTCCAATGCACTATAATATATTGTTTCAAATATTT 47643 || || || || |||| |||||||| ||||| || |||| Sbjct 806822 GCTAGCCTCTAACGCACCGTAATATATAGTTTCGAAAATTT 806862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562097199479640