Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20brevipalpis_20[genbank_20GCA_5F000671755.1_202014-05-08] 1,651 sequences; 315,360,362 total letters Query= NC_016761.1 Length=38684 Score E Sequences producing significant alignments: (Bits) Value seq439 136 1e-27 >seq439 Length=76666 Score = 136 bits (150), Expect = 1e-27 Identities = 302/453 (67%), Gaps = 0/453 (0%) Strand=Plus/Minus Query 27041 TTGTGCTTACTGATACCAAACTAAAAAACCTCAAGCCGCAGGACAAACTGTATAAGGTTT 27100 || ||||||| || || ||||||| |||||| || || | |||||||| || || | Sbjct 76079 TTATGCTTACAGACACAAAACTAAGAAACCTAAAACCTCGCGACAAACTCTACAAAATCC 76020 Query 27101 CGGATCGTGACGGGCTGTATGTTGCGGTGCTTACTTCCGGCTCTGTCTCTTTCCGGTACG 27160 | ||| | |||||||| || || || || || | ||| |||| || ||||| || | Sbjct 76019 CCGATAGAGACGGGCTCTACGTAGCTGTTCTGCCAAGCGGTTCTGCATCGTTCCGCTATG 75960 Query 27161 ACTACCGCATTAACGGGCGCCGGGAAACGCTGGTCATCGGTCAGTACGGTCGTGACGGTA 27220 |||||||||| | || | || ||||| || || ||| || || |||||||| Sbjct 75959 ACTACCGCATACATGGCAGGCGTGAAACTTTGACGATTGGTAGATATGGAGCTGACGGTA 75900 Query 27221 TCAGCCTGGCAGAAGCACGAGAAGAACTCATTGCTGCCAAAAAACTGTTAAATGCAGGCC 27280 ||||| | || ||||| || |||||| | | | |||||||||| | || | |||| | Sbjct 75899 TCAGCTTAGCCGAAGCCCGTGAAGAATTACATACCGCCAAAAAACAGCTAGAGTCAGGTC 75840 Query 27281 AGTCGCCAGCTGCGGCTAAACGTGACGGTATCAAAAAGATCCGCGGGGCTGAGACATTCG 27340 |||| || ||||| | ||||| || ||||| || | | || || || | Sbjct 75839 AGTCACCTGCTGCCGTAAAACGAGAAAATATCAGGCAGCTAAAGGCTGCAGATCGCTTTG 75780 Query 27341 CGGTACATACCGACAGCTATATGAAGCACGTCATTCTGGCTGACAGTACCCGCGCCATGA 27400 || |||| | |||||||| || || | ||||| || || || |||| Sbjct 75779 AGGACTATACTTTCGCTTATATGAATCATGTGCGATTTGCTGAAAGCACAAAAGCAATGA 75720 Query 27401 AGCAGGCAGTGATAGACCGTGACATACTTCCTGTGCTTGGCAACAAGATGATGGCTGAGA 27460 |||| || || || || ||||||||| | ||| || || || || | ||| || | Sbjct 75719 AGCAAGCGGTTATCGATCGTGACATATTACCTACACTGGGTAAAAAACTTATGCACGAAA 75660 Query 27461 TCACCACATCGATGGTGCGCGATCTGTGCGACA 27493 | || || | ||| | || ||||| ||||||| Sbjct 75659 TAACTACTACCATGTTACGTGATCTATGCGACA 75627 Score = 134 bits (148), Expect = 3e-27 Identities = 173/236 (73%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 36186 CTGGTACCGGTTCGAAGGTATCAAGCTGCGCCTGGCTGATAACACGTTCTACACGCCGGA 36245 ||||| | ||| ||||| |||||||||| |||| || ||||| ||||||||||| || Sbjct 60350 CTGGTTCAAGTTTGAAGGAGTCAAGCTGCGTCTGGGCGACAACACATTCTACACGCCTGA 60291 Query 36246 CTTCGCAGTGATGCTAACCAGTGGTGAGATGGAACTGCACGAGGTGAAAGGATTCTGGAC 36305 || | |||||| | | ||| |||||| ||||||| | ||||| |||||||| Sbjct 60290 TTTTGTCGTGATGAACAGCGATGGAACTATGGAAATGCACGAAATTAAAGGGTTCTGGAC 60231 Query 36306 CGACGACGCCAGGGTGAAAACCAAAGTCGCAGCAGACCAGTACCCGTTTCGCATCATCGG 36365 ||| ||||||||||| |||| ||||||||| || ||| |||||| ||| || | || Sbjct 60230 CGATGACGCCAGGGTCAAAATCAAAGTCGCTGCTGACATGTACCC-ATTCAAATTTTTGG 60172 Query 36366 -GGTAACGGTTAAGCCAAAGAAAGCGGGTGGCGGCTGGAACATCGAAGAATTCTAA 36420 | | || | || || ||||| || || |||||| | |||||||| || ||| Sbjct 60171 CCATCAAGGCTCAGAGCAAAAAAGCTGGCGGGGGCTGGCAAATCGAAGAGTTTTAA 60116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123664775427252