Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20brevipalpis_20[genbank_20GCA_5F000671755.1_202014-05-08] 1,651 sequences; 315,360,362 total letters Query= NC_016762.1 Length=49135 Score E Sequences producing significant alignments: (Bits) Value seq439 156 1e-33 >seq439 Length=76666 Score = 156 bits (172), Expect = 1e-33 Identities = 330/491 (67%), Gaps = 6/491 (1%) Strand=Plus/Minus Query 24320 ATTCTCTGCGGCCGGGAGTACATGAACAGCCTGGAAGACTCCTCCATGGAGGAGGTCAAG 24379 || || |||| || |||| |||||| |||||||| || ||| |||| || || Sbjct 9209 ATACTTTGCGTGCGTGAGTTTATGAACTCGCTGGAAGAGTCGAGTATGCAGGAAGTGAAA 9150 Query 24380 CAGGCGATCCGGTCCGAACCCTGGCTCAACGCCTACTTCGAGATCGGCGAGAAGTTCATC 24439 | ||| || | ||| | || ||||| || |||| || ||||| || || | ||| Sbjct 9149 CTGGCAATACAGTCAGTGCCATGGCTGGCGGCTCACTTTGATATCGGTGAAAAATACATT 9090 Query 24440 CGCACCCGCAACCGACGAGTGTGGTTCTCGTTCTCCGGCTTGCGCCACAACCTCGACAGC 24499 ||||||| | || | |||||| | | |||| || | || || || || ||||| Sbjct 9089 CGCACCCTCGACAGGCGAGTGAGCTATGTGTTCAGTGGACTTCGGCATAATCTTGACAGT 9030 Query 24500 ATCAAGTCGAAGGCGCGCATCCTCATCGCTTGGGTCGATGAGGCCGAGAACGTCAGCGAG 24559 ||||| ||||| || || || || | ||||| |||||||| || | ||| ||||| Sbjct 9029 ATCAAATCGAAAGCACGTATTCTGCTGTGCTGGGTGGATGAGGCTGAAACCGTTAGCGAA 8970 Query 24560 ATCGCCTGGCAGAAGCTGCTGCCGACGGTCCGCGAGTGCGACTCCGAAGTCTGGATCACC 24619 || ||||||||||| || || || || || ||| | ||| ||||| ||| | || Sbjct 8969 ATAGCCTGGCAGAAACTCGATCCCACCGTACGAGAGCCTGGCTCTGAAGTATGGGTAACA 8910 Query 24620 TGGAACCCGGAGAAGGACGGCAGCCCGACCGACACTAGGTTCCGGAAGAATATTCCGGCC 24679 |||||||| |||| || || ||| ||||||| | | || || ||| ||| | | Sbjct 8909 TGGAACCCTGAGACAGAGGGTAGCGCGACCGATAAGCGATTTCGCAAGGATAGT---GAT 8853 Query 24680 GGCGCCAAGATC---GTCGAGCTGAACTACACGGACAACCCTTGGTTCCCCGATGTCCTC 24736 | ||||| ||| || || ||||||||| ||| || || ||||| | | ||| || Sbjct 8852 GACGCCATTATCGCGGTTGAAATGAACTACATGGATAATCCATGGTTTCACAGTGTGCTT 8793 Query 24737 GATCAGGAGCGCCTGAACGACCGGGAGACGCTGGACGACCAGACCTATGCCTGGATCTGG 24796 || || | | | | | |||| | ||| ||| |||||||||||||| ||| Sbjct 8792 GAGCAAGTGAGGCAGCGGGACCTCCGTATGCTTGACTCGGCAACCTATGCCTGGATTTGG 8733 Query 24797 GATGGCGCCTA 24807 || ||||| || Sbjct 8732 GAAGGCGCGTA 8722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157107319752414