Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20brevipalpis_20[genbank_20GCA_5F000671755.1_202014-05-08] 1,651 sequences; 315,360,362 total letters Query= NC_017984.1 Length=46387 Score E Sequences producing significant alignments: (Bits) Value seq439 95.1 4e-15 >seq439 Length=76666 Score = 95.1 bits (104), Expect = 4e-15 Identities = 169/247 (68%), Gaps = 0/247 (0%) Strand=Plus/Minus Query 4126 CTTTGTGGTCGTGAGTTTATGAATACGCTTGCAGATTCTTCTATGGAGGAAATTAAGCAA 4185 ||||| | |||||||||||||| |||| | ||| || |||| ||||| | || | Sbjct 9206 CTTTGCGTGCGTGAGTTTATGAACTCGCTGGAAGAGTCGAGTATGCAGGAAGTGAAACTG 9147 Query 4186 GCTATTCGTGAAGAGCCATTTCTAAATAATTATTATGAGATGGGTAAAAACTACATAAGA 4245 || || | || ||||| || | | | ||| || ||| |||| ||||| | Sbjct 9146 GCAATACAGTCAGTGCCATGGCTGGCGGCTCACTTTGATATCGGTGAAAAATACATTCGC 9087 Query 4246 ACCAAGAATAAGCGCGTAACTTACTCATTTTGTGGTTTGCGTCATAACTTAGATAGCATC 4305 ||| | | ||| || | || || |||| | || ||||| | || || ||| Sbjct 9086 ACCCTCGACAGGCGAGTGAGCTATGTGTTCAGTGGACTTCGGCATAATCTTGACAGTATC 9027 Query 4306 AAGTCTAAAGCACGTATTTTGCTTAGTTGGGTGGATGAGGCTGAAACGGTCAGTGAAATG 4365 || || |||||||||||| |||| | |||||||||||||||||||| || || ||||| Sbjct 9026 AAATCGAAAGCACGTATTCTGCTGTGCTGGGTGGATGAGGCTGAAACCGTTAGCGAAATA 8967 Query 4366 GCGTGGC 4372 || |||| Sbjct 8966 GCCTGGC 8960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148313892156438