Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20brevipalpis_20[genbank_20GCA_5F000671755.1_202014-05-08] 1,651 sequences; 315,360,362 total letters Query= NC_018846.1 Length=60894 Score E Sequences producing significant alignments: (Bits) Value seq439 167 9e-37 >seq439 Length=76666 Score = 167 bits (184), Expect = 9e-37 Identities = 368/549 (67%), Gaps = 6/549 (1%) Strand=Plus/Minus Query 9755 CCATTGTTCTCCAAATACAAAACCAATTTCCGCCAGTGCTTCGTCCATTTTGTCGATGAA 9814 ||| || || ||||| ||| |||| ||| || | || |||||| | || || || Sbjct 70427 CCACTGCTCGCCAAAGGTAAAGCCAAGTTCAGCTAACGCCATATCCATTCTTTCTATAAA 70368 Query 9815 CTCCGGCACCATCTCATCAAAACTCGCCATGTACTTTTCATCCCGCTCGACCACGACATA 9874 ||| || || ||| ||||| | | ||||| || || || || || | | ||| | Sbjct 70367 CTCTGGTACGGACTCTTCAAATTTTGAAATGTATTTATCGTCTCGTTCAATAATGACGTT 70308 Query 9875 ATGCAGGCCTTCACGCTTCATGCGTGGGTCGTAGTTGGCGAAGTACCAGGCGTCCTTGTC 9934 || || |||||||| ||||| || ||||| ||||| || || | ||| ||||| || | Sbjct 70307 GTGAAGTCCTTCACGTTTCATTCGAGGGTCATAGTTAGCAAAATGCCATGCGTCTTTCCC 70248 Query 9935 TGTAACCCACATGCTGAATTGCACCTGGGCCATGTAAGCAGGCTTGATAGCGTCAAAGCC 9994 |||||||||||||| || || ||||| ||||| || | | ||||| |||||||||| Sbjct 70247 CGTAACCCACATGCTAAACTGGACCTGAGCCATATATTCCGATTTGATGCCGTCAAAGCC 70188 Query 9995 GCCAAGCCGGAATTTCATGAAGTCGCGGGAAGTAAAAGGGCATTTAAGCTCAAGACCGTT 10054 || | || || || |||||||| || ||||| || || || | ||||| || Sbjct 70187 ATTCAGTCTAAAATTAATAAAGTCGCGTGATGTAAATGGACACTTTAATTCAAGTCCCAG 70128 Query 10055 ACCGTCGCTGCATAAACCGTCGGGAGAGCAGGCGGTGCGCATGCTTTCGTCACGAAAAAT 10114 || || || || || ||||| ||||| || ||||| ||||| || || Sbjct 70127 CCCATCACTACAGTCGCCATCGGGGGAGCACGCTACACGCATATCGTCGTCCTTGAATAT 70068 Query 10115 TATTGG--CGTTTCCGA-GACGGTAACATCCGCGATAAATTCGAAGAGGGCACGGGCATC 10171 || || ||| ||| ||||| | | | | || || || || | || | Sbjct 70067 GATGGGGACGT---CGATAACGGTTAACCCTGTAGTGAACTCAAACAGTCGTCTTGCTAC 70011 Query 10172 ATCTTCGTATTGCTTTCCCCATGCGAGCGACTTAGCGTTAACTTCCGGTGCCACGCCAGT 10231 ||||||| || ||||||||| | |||| | | || || ||||| || | || || Sbjct 70010 CTCTTCGTTTTCTTTTCCCCATTCTAGCGGCCTTGCCTTCACTTCGGGAGATTGCCCGGT 69951 Query 10232 ACAAACTTCAGCCAGCAGGGTGTGGAAGTATGACATTTTTGTATCAGGCCATTTGCTGCC 10291 ||||| || || | ||| ||| |||||| ||| || ||||| | ||||||| |||| Sbjct 69950 ACAAATCTCGGCAATCAGCTTGTTGAAGTAAGACCGCTTCGTATCCGTCCATTTGTTGCC 69891 Query 10292 GGAACGTGG 10300 |||||||| Sbjct 69890 TGAACGTGG 69882 Score = 82.4 bits (90), Expect = 3e-11 Identities = 78/100 (78%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 12600 TGAAATAGCAGTCTTCCAGTTTTTCGAACACTTCCCACGCCCGATCGGTTTCGAGCATTT 12659 |||| || || |||||||||| ||||| |||||||| || ||| || || | ||| | Sbjct 38650 TGAAGTAACAATCTTCCAGTTGCTCGAATACTTCCCATGCTTTATCAGTCTCAAACATCT 38591 Query 12660 TTGCGTGACGGGCTGCGCCGCGTTCTGTCCAGAGGATGAG 12699 | || || | || || ||||||||||||||||||||||| Sbjct 38590 TGGCATGTCAAGCGGCTCCGCGTTCTGTCCAGAGGATGAG 38551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194735382016272