Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20brevipalpis_20[genbank_20GCA_5F000671755.1_202014-05-08] 1,651 sequences; 315,360,362 total letters Query= NC_019488.1 Length=34117 Score E Sequences producing significant alignments: (Bits) Value seq804 105 1e-18 seq735 104 5e-18 >seq804 Length=1783 Score = 105 bits (116), Expect = 1e-18 Identities = 120/161 (75%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 1450 ACAGCATCTTCAAGATGTTCTGGTGCGAAATGGGCATAGACCATTGTCATTTTTATATCT 1509 || |||| || ||||| || ||||| ||||| |||||| ||||||| | |||| Sbjct 656 ACGGCATTTTGAAGATAGTCGGGTGCTAAATGAGCATAGGCCATTGTTTGCTGGATATTG 597 Query 1510 GAGTGCCCTAAAATATCTCTCAATACAAGAATATTTCCGCCATTCATCATAAAGTGACTA 1569 | || || ||||| ||| || | ||| |||||| || |||||||||||||| |||||| Sbjct 596 GCATGTCCCAAAATTTCTTGCAGTGCAATAATATTACCACCATTCATCATAAAATGACTA 537 Query 1570 GCGAATGTATGGCGCAATACATGCGTGCACTGGCCCTCTGG 1610 || |||||||| || | ||||| || |||||| | ||| Sbjct 536 GCAAATGTATGACGTAGCACATGTGTTGCCTGGCCGTGTGG 496 >seq735 Length=2270 Score = 104 bits (114), Expect = 5e-18 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 24814 ATCCCTGCTGGTTACGCCCTGATGCAGGGGCAAGCATTTGATAAGAACGTTTATCCCTTA 24873 || || || || || |||||||||||||| || | |||||||| | | |||||| | Sbjct 2269 ATTCCCGCAGGCTATGCCCTGATGCAGGGACAGACGTTTGATAAAAGCACATATCCCAAA 2210 Query 24874 CTGGCAATAGCATATCCATCCGGCACTATTCCGGACATGCGCGGCTGGACAATCAAAGGC 24933 ||||||| || || ||||| || | ||||| || ||||| ||||||| ||||||||| Sbjct 2209 TTGGCAATGGCTTACCCATCAGGGATCATTCCTGATATGCGTGGCTGGATGATCAAAGGC 2150 Query 24934 AAGCCCGCGAGCGGGCGCGCTGTGCTATCTCAGGAGCTGGATGGCAACAAATCGCACAGT 24993 ||||| | || || ||| | | || |||| |||||||| ||||| || ||| Sbjct 2149 AAGCCTGAAAGTGGACGCTCAACCTTGAGCCAAGAGCAGGATGGCATAAAATCACATAGT 2090 Query 24994 CA 24995 || Sbjct 2089 CA 2088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 109050661951698