Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20brevipalpis_20[genbank_20GCA_5F000671755.1_202014-05-08] 1,651 sequences; 315,360,362 total letters Query= NC_020200.1 Length=36429 Score E Sequences producing significant alignments: (Bits) Value seq550 100 7e-17 >seq550 Length=29371 Score = 100 bits (110), Expect = 7e-17 Identities = 160/228 (70%), Gaps = 4/228 (2%) Strand=Plus/Minus Query 15942 CCGCCTGGATACCATCTACCAGACCAACATGCAGTCGGCCTACATGGCAGGGCGCTAC-- 15999 ||| ||||| || || | | ||||| | ||||| ||||| ||||| |||||||| Sbjct 14245 CCGGCTGGAGACGATTTTTCGCACCAATACCCAGTCTGCCTATATGGCCGGGCGCTATCA 14186 Query 16000 GCGGCCGCCTACGAAGCCAGGGAAACCCACCCTTACTGGATGTATGTGGCGGTGATGGAT 16059 ||||| || ||| | || | || |||||| |||||||||||||||||| Sbjct 14185 GCGGCTGCGCGAGAA--CGTCGACCAGCGGCCCTACTGGCAGTATGTGGCGGTGATGGAC 14128 Query 16060 GGCGTTACCCGGGCCAGCCATGCCGCCCTGCATGGGAAAGTGTTCAGGTGGGACGATCCG 16119 || ||||| ||||||||||||| |||||||| |||||| | | |||||| || Sbjct 14127 AGCCACACCCGCCCCAGCCATGCCGCGCTGCATGGCCGGGTGTTCCGTTATGACGATGCG 14068 Query 16120 ATCTGGCAGCACATCACCCCGCCCAATGGCTACAACTGCCGGTGCCGG 16167 |||| | | | || || || |||||||||||||| |||||| Sbjct 14067 GGCTGGGATACCCTGTTTCCCCCGAACGGCTACAACTGCCGCTGCCGG 14020 Score = 80.6 bits (88), Expect = 6e-11 Identities = 187/275 (68%), Gaps = 9/275 (3%) Strand=Plus/Minus Query 14794 CCTGGGCCATGCTGCCGCAGGGATCATCCCCGAAACCATGGCCATCGACTTCCAGCAGGC 14853 |||||| ||| |||| || || |||| |||| || || ||| ||| | | Sbjct 15358 CCTGGGGCATAACGCCGGCGGCATTATCCACGAACGCACCGCTATCCGCTTTGAATCCGT 15299 Query 14854 CGCGCAGGGTAGCAG--CGAGCCGTTCCTGGCGATGATGCGGCAAAGCGAAGACGCCATA 14911 ||| ||||| |||| ||| ||||||| | ||||||| | ||||| | || Sbjct 15298 CGCCCAGGG--GCAGGTCGACCCGTTCCAGTATATGATGCAGTGGTGCGAAAGCACCCAG 15241 Query 14912 TCCAAGGCGGTCCTGGGCGGCACCCTGACCAGCACCACCAGCCAGTCAGGCGGCGGCGCT 14971 ||||||| | ||||||||||||||||||| ||| ||| | | || | || | Sbjct 15240 TCCAAGGTCATTCTGGGCGGCACCCTGACCA-CACAGGCAGACGGCAAGAA--CAGCACC 15184 Query 14972 TTTGCCCTGGGCCAGGTGCATAACGAGGTTCGGCACGA-CATACTGGCATCCGATGCCCG 15030 |||||||||| | ||||||||||||| || ||||| | || | || |||||| Sbjct 15183 AATGCCCTGGGCAACGTGCATAACGAGGGGCGCCACGAGCTGACCGCCA-GCGATGCGGT 15125 Query 15031 CCAACTGGCGGCCACGTTGTCCCGCGATCTGCTCT 15065 || | ||| | |||| || ||||||| ||||||| Sbjct 15124 GCAGCGGGCCGGCACGCTGACCCGCGACCTGCTCT 15090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 116448916901442