Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20brevipalpis_20[genbank_20GCA_5F000671755.1_202014-05-08] 1,651 sequences; 315,360,362 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq56 118 1e-21 >seq56 Length=1379499 Score = 118 bits (130), Expect = 1e-21 Identities = 199/287 (69%), Gaps = 6/287 (2%) Strand=Plus/Minus Query 47788 CCTGTGGCAATAACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCTCG 47847 || || ||||| |||||||| || || |||||||||| | |||||| || || Sbjct 457653 CCGGTAGCAATTACAAAATCGGACGGGCTATCACGTTGAAGCATCATCCACATGGCTTCT 457594 Query 47848 ACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACAG 47907 |||||||| ||| |||||||| ||||| | ||||||||| || || | ||| | Sbjct 457593 ACATAATCCACGGCGTGTCCCCAATCACGTTTCGAATCAAGATTGCCCAGTTCAAAATAT 457534 Query 47908 TC---TTGCTTACCTTCAGAGATTGCTTTTAATGCTCTTGTAATCTTACGAGTTACAAAA 47964 || ||| || | | | ||| || | | ||||||||||| || || ||| Sbjct 457533 TCCAATTGGTT---TAAATAAATTTTGGCTACGGAACGAGTAATCTTACGGGTCACGAAA 457477 Query 47965 GTTTCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCG 48024 |||| ||||||||||| |||||||||||||| | ||||||| | || ||| |||| Sbjct 457476 TTTTCCCCACGTCTTGGCGATTCATGATTAAATAAAATACCATTGCAAGCAAACATATTA 457417 Query 48025 TATGATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGC 48071 || | || ||||| || || |||||| | ||||| | ||| || Sbjct 457416 TAAGCCTCTCGATAATTAACAACAATCCAGAAGCCATACATTTTAGC 457370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665480665859320