Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20brevipalpis_20[genbank_20GCA_5F000671755.1_202014-05-08] 1,651 sequences; 315,360,362 total letters Query= NC_021190.1 Length=46150 Score E Sequences producing significant alignments: (Bits) Value seq439 196 1e-45 >seq439 Length=76666 Score = 196 bits (216), Expect = 1e-45 Identities = 396/585 (68%), Gaps = 2/585 (0%) Strand=Plus/Minus Query 27954 TTCCACTGTTCCCCGAACGTGAAGCCGATCTCTGCCAGCGCCTCGTCCATCTTCTCGATG 28013 |||||||| || || || || ||||| | || || | |||| ||||| | || || Sbjct 70429 TTCCACTGCTCGCCAAAGGTAAAGCCAAGTTCAGCTAACGCCATATCCATTCTTTCTATA 70370 Query 28014 AACTCCGGCACCATTTCGTTGAAATCGGACATGTACTGAGGATCCCGCTCAACGACGACG 28073 ||||| || || || | || | || ||||| | | || || |||| | |||| Sbjct 70369 AACTCTGGTACGGACTCTTCAAATTTTGAAATGTATTTATCGTCTCGTTCAATAATGACG 70310 Query 28074 TGGTGAATGCCTTCGCGTTTCATGCGCGGGTCGTAGTTTGCAAAGAACCATGCGTCTTTT 28133 | ||||| ||||| |||||||| || ||||| ||||| ||||| |||||||||||| Sbjct 70309 TTGTGAAGTCCTTCACGTTTCATTCGAGGGTCATAGTTAGCAAAATGCCATGCGTCTTTC 70250 Query 28134 CCGGTCACCCACATGCTGTACTGCACCTGGGCCATGTACGCAGACTTGATGGCTTCGAAA 28193 || || ||||||||||| |||| ||||| ||||| || | || |||||| | || || Sbjct 70249 CCCGTAACCCACATGCTAAACTGGACCTGAGCCATATATTCCGATTTGATGCCGTCAAAG 70190 Query 28194 CCGCCAAGGCGGAATTTCATGAAGTCGCGGGAGGTGAAAGGGCATTTAAGCTCAAGGCCG 28253 || || | || || || |||||||| || || || || || || | ||||| || Sbjct 70189 CCATTCAGTCTAAAATTAATAAAGTCGCGTGATGTAAATGGACACTTTAATTCAAGTCCC 70130 Query 28254 AACCCGTTACTGCACAGGCCGTCAGGGGAGCAGGCGGTGCGCATGCTCTCGTCACGGAAC 28313 | ||| | ||| || ||| || |||||||| || ||||| ||||| ||| Sbjct 70129 AGCCCATCACTACAGTCGCCATCGGGGGAGCACGCTACACGCATATCGTCGTCCTTGAAT 70070 Query 28314 AAGATCGGAGAC-TCCGTGACTTTCACGTCAGTGGTGAACTCGAAGAGGGTGCGGGCGTC 28372 | ||| || ||| || | || | | | || |||||||| || || | || | Sbjct 70069 ATGAT-GGGGACGTCGATAACGGTTAACCCTGTAGTGAACTCAAACAGTCGTCTTGCTAC 70011 Query 28373 TTCTTCGTACTGCTTGCCCCAGGCCAGCGCCTTGGCGTTAACCTCTGGCGCTACACCGGT 28432 ||||||| | || ||||| | |||| | | || || || || || | | ||||| Sbjct 70010 CTCTTCGTTTTCTTTTCCCCATTCTAGCGGCCTTGCCTTCACTTCGGGAGATTGCCCGGT 69951 Query 28433 GCATACCTCGGCGAGCAAGGTGTGGAAGTAGGACATTTTCATGTCTGTCCATTTGCTGCC 28492 || | |||||| | || ||| |||||| ||| ||| | || ||||||||| |||| Sbjct 69950 ACAAATCTCGGCAATCAGCTTGTTGAAGTAAGACCGCTTCGTATCCGTCCATTTGTTGCC 69891 Query 28493 AGATCGAGGCTTGGAAATGACGTTGTGAGCGTCAGAGGCAGTAAT 28537 || || || ||||||| ||| | ||| || ||||| || || Sbjct 69890 TGAACGTGGGCTGGAAATCACGCAGGAAGCCTCTGAGGCGGTTAT 69846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147555507025344