Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20brevipalpis_20[genbank_20GCA_5F000671755.1_202014-05-08] 1,651 sequences; 315,360,362 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq134 131 5e-25 >seq134 Length=634362 Score = 131 bits (144), Expect = 5e-25 Identities = 226/326 (69%), Gaps = 2/326 (1%) Strand=Plus/Plus Query 302553 ATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGT 302612 ||| ||| || ||||| ||||||| ||| || | ||| ||||||||||||||||| Sbjct 352218 ATCGTAATTAACCATAACAGATTCCATAGCCTTTATCAGACGGCGCTGAATATAACCAGT 352277 Query 302613 TGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATG-GAAGA 302671 | | || |||||||| |||||||| ||||| |||||||||||||||| || || | Sbjct 352278 TTCGGCAGTCTTTACAGCGGTATCAATAAGACCTTCACGACCACCCATAGCGTGAAAATA 352337 Query 302672 ATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGG 302731 ||| ||| ||| || || | | | ||||| | || |||||||| | | || | Sbjct 352338 ATA-CTCGGATGGTGTTAAGCCGGCTAGATAGGAGTTTTCTACGAAACCTCTGGATTCAG 352396 Query 302732 GCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATAC 302791 | | ||| |||| |||||||||||| || | || | | || || || |||| Sbjct 352397 GGCCGTAGTCATCCTTGATAAAGTGTGGCAAAGTTCGTTTACGAAAACCATAAGGTATAC 352456 Query 302792 GCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCAC 302851 | || || || || ||||| ||||||| || | ||| | || |||||||| | || Sbjct 352457 GTTTACCTTCTACATTCTGTTGTCCCACACAAGCAATAACTTGTGAAATATTAATATTGG 352516 Query 302852 TGCCCTTGGAGCCAGCATTTACCATA 302877 || ||||| |||| ||||||| Sbjct 352517 AACCTTTGGACCCAGATACTACCATA 352542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471786465998387