Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20brevipalpis_20[genbank_20GCA_5F000671755.1_202014-05-08] 1,651 sequences; 315,360,362 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq53 86.0 4e-12 >seq53 Length=1361919 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 |||||| ||||||||||| || || || | || |||| |||| ||| || || ||||| Sbjct 1234427 CTCCTTTTGAATGTTATAATCGGAGAGAGTACGGCCATCTTCCAATTGTTTACCAGCGAA 1234368 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| || ||||||||| | || | || ||||| || | || || ||||||| Sbjct 1234367 GATCAAACGCTGCTGGTCTGGGGGAATACCTTCCTTATCCTGGATCTTAGCTTTGACGTT 1234308 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | | || | || | |||||| || | || ||||| || || || | || || || Sbjct 1234307 TTCAATGGTATCGGAAGGCTCGACTTCCAAAGTGATGGTTTTACCGGTCAAAGTTTTGAC 1234248 Query 34966 AAAGATCTGCAT 34977 ||||| ||||| Sbjct 1234247 GAAGATTTGCAT 1234236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325686246551969