Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20brevipalpis_20[genbank_20GCA_5F000671755.1_202014-05-08] 1,651 sequences; 315,360,362 total letters Query= NC_023700.1 Length=34553 Score E Sequences producing significant alignments: (Bits) Value seq550 134 3e-27 >seq550 Length=29371 Score = 134 bits (148), Expect = 3e-27 Identities = 167/227 (74%), Gaps = 4/227 (2%) Strand=Plus/Minus Query 13837 CCGGCTGGAAACGATCTACCAGACCAACGTGCAGTCGGCCTACATGGCCGGGCGCTAT-- 13894 ||||||||| ||||| | | ||||| ||||| ||||| ||||||||||||||| Sbjct 14245 CCGGCTGGAGACGATTTTTCGCACCAATACCCAGTCTGCCTATATGGCCGGGCGCTATCA 14186 Query 13895 GCCGCCGCATACGAGGCCAGGGAAACTCACCCTTACTGGATGTATGTGGCCGTCATGGAC 13954 || || || |||| | || | || |||||| ||||||||| || |||||| Sbjct 14185 GCGGCTGCG--CGAGAACGTCGACCAGCGGCCCTACTGGCAGTATGTGGCGGTGATGGAC 14128 Query 13955 AGCGTCACCCGGCCCAGCCATGCGGCGCTACATGGCAAGGTGTTCCGCTGGGACGACCCG 14014 ||| |||||| ||||||||||| ||||| |||||| ||||||||| | ||||| || Sbjct 14127 AGCCACACCCGCCCCAGCCATGCCGCGCTGCATGGCCGGGTGTTCCGTTATGACGATGCG 14068 Query 14015 ATCTGGCAGCACATCATGCCGCCGAATGGCTACAACTGCCGGTGCCG 14061 |||| | | | | || ||||| |||||||||||||| ||||| Sbjct 14067 GGCTGGGATACCCTGTTTCCCCCGAACGGCTACAACTGCCGCTGCCG 14021 Score = 82.4 bits (90), Expect = 2e-11 Identities = 80/103 (78%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 12053 CATCTTGATCGAGGCCGAGCAGGGTCAACTCCAGGCTCAGGCCGAGCTGTTCATGGACAT 12112 |||| ||| ||||||||||||||| || || | ||||| || ||||| | || || Sbjct 15912 CATCCTGAGCGAGGCCGAGCAGGGGCACCTGGTGCGCCAGGCTGACCTGTTTTTTGATAT 15853 Query 12113 GGAGGAACGCGACGCCCACCTATTCGCAGAAATGAGCAAGCGC 12155 |||||| ||||||| ||| || || || || |||||||||||| Sbjct 15852 GGAGGAGCGCGACGGCCATCTTTTTGCCGAGATGAGCAAGCGC 15810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 110445834597930