Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20brevipalpis_20[genbank_20GCA_5F000671755.1_202014-05-08] 1,651 sequences; 315,360,362 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq3 89.7 6e-13 >seq3 Length=6096599 Score = 89.7 bits (98), Expect = 6e-13 Identities = 115/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 117304 AGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTG 117363 ||| || || ||||||| || ||| ||| |||||||||| | ||| ||||||||||| Sbjct 1520533 AGTAAATATATAACGAGCACTAGCACTATCTTTGCCACCAGTTAAACGGGTACCGAATTG 1520592 Query 117364 TCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGAC 117423 || || || ||||| || || | || |||| ||||||| | |||||||| || || || Sbjct 1520593 ACCTCTTGGTTCCAAAAGATTAATATTATTGGAGCCCACATAATTTTGAGCTAAATTAAC 1520652 Query 117424 AATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGC 117462 || || ||| | | |||||||| ||||| || Sbjct 1520653 TATAGTCATTTGTAAAGATACTTCACCATGATGATAAGC 1520691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547204706829800