Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20brevipalpis_20[genbank_20GCA_5F000671755.1_202014-05-08] 1,651 sequences; 315,360,362 total letters Query= NC_028660.1 Length=61035 Score E Sequences producing significant alignments: (Bits) Value seq439 167 9e-37 >seq439 Length=76666 Score = 167 bits (184), Expect = 9e-37 Identities = 368/549 (67%), Gaps = 6/549 (1%) Strand=Plus/Plus Query 23602 CCACGTTCCGGCAGCAAATGGCCTGATACAAAAATGTCATACTTCCACACCCTGCTGGCT 23661 |||||||| |||| ||||||| | ||||| || ||| |||||| ||| ||| | || Sbjct 69882 CCACGTTCAGGCAACAAATGGACGGATACGAAGCGGTCTTACTTCAACAAGCTGATTGCC 69941 Query 23662 GAAGTTTGTACTGGCGTGGCACCGGAAGTTAACGCTAAGTCGCTCGCATGGGGAAAGCAA 23721 || ||||||| || | || ||||| || || | | |||| | ||||||||| || Sbjct 69942 GAGATTTGTACCGGGCAATCTCCCGAAGTGAAGGCAAGGCCGCTAGAATGGGGAAAAGAA 70001 Query 23722 TACGAAGATGATGCCCGTGCCCTCTTCGAATTTATCGCGGATGTTACCGTC-TCGGAAAC 23780 ||||||| | || | || || || || | | | | ||||| ||| || Sbjct 70002 AACGAAGAGGTAGCAAGACGACTGTTTGAGTTCACTACAGGGTTAACCGTTATCG---AC 70058 Query 23781 G--CCAATAATTTTTCGTGACGAAAGCATGCGCACCGCCTGCTCTCCCGACGGTTTATGC 23838 | || || || || ||||| ||||| || ||||| ||||| || || Sbjct 70059 GTCCCCATCATATTCAAGGACGACGATATGCGTGTAGCGTGCTCCCCCGATGGCGACTGT 70118 Query 23839 AGCGACGGTAACGGTCTTGAGCTTAAATGCCCTTTTACTTCCCGCGACTTCATGAAATTC 23898 || || || || ||||| | || || || ||||| || |||||||| || || || Sbjct 70119 AGTGATGGGCTGGGACTTGAATTAAAGTGTCCATTTACATCACGCGACTTTATTAATTTT 70178 Query 23899 CGGCTTGGCGGCTTTGACGCTATCAAGCCTGCTTACATGGCCCAGGTGCAATTCAGCATG 23958 | || |||||||||| ||||| | | || ||||| ||||| || || |||||| Sbjct 70179 AGACTGAATGGCTTTGACGGCATCAAATCGGAATATATGGCTCAGGTCCAGTTTAGCATG 70238 Query 23959 TGGGTTACAGACAAGGACGCCTGGTACTTCGCCAACTACGACCCACGCATGAAGCGTGAA 24018 |||||||| | || ||||| ||| | || || ||||| ||||| || ||||| |||||| Sbjct 70239 TGGGTTACGGGGAAAGACGCATGGCATTTTGCTAACTATGACCCTCGAATGAAACGTGAA 70298 Query 24019 GGCCTGCATTATGTCGTGGTCGAGCGGGATGAAAAGTACATGGCGAGTTTTGATGAGATG 24078 || || || | ||| | | || || || || || ||||| | | ||||| ||| Sbjct 70299 GGACTTCACAACGTCATTATTGAACGAGACGATAAATACATTTCAAAATTTGAAGAGTCC 70358 Query 24079 GTGCCGGAGTTCATCGACAAAATGGACGAAGCACTGGCGGAAATTGGTTTTGTATTTGGA 24138 || || ||||| || || | |||||| || | || ||| |||| ||| ||||| Sbjct 70359 GTACCAGAGTTTATAGAAAGAATGGATATGGCGTTAGCTGAACTTGGCTTTACCTTTGGC 70418 Query 24139 GAACAATGG 24147 || || ||| Sbjct 70419 GAGCAGTGG 70427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 195186573170214