Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20brevipalpis_20[genbank_20GCA_5F000671755.1_202014-05-08] 1,651 sequences; 315,360,362 total letters Query= NC_028995.1 Length=43216 Score E Sequences producing significant alignments: (Bits) Value seq439 100 8e-17 >seq439 Length=76666 Score = 100 bits (110), Expect = 8e-17 Identities = 174/252 (69%), Gaps = 1/252 (0%) Strand=Plus/Minus Query 10862 CTTTGTGGTCGTGAGTTTATGAATACGCTTGCTGATTCTTCAATGGAAGAAATTAAGCAG 10921 ||||| | |||||||||||||| |||| | || || ||| | ||| | || | | Sbjct 9206 CTTTGCGTGCGTGAGTTTATGAACTCGCTGGAAGAGTCGAGTATGCAGGAAGTGAAACTG 9147 Query 10922 GCGATTCGAGAAGAACCGTTTCTAAATGATTATTATGAAATGGGTGAAAACTACATAAGA 10981 || || | || || | || | | | | ||| || |||||||| ||||| | Sbjct 9146 GCAATACAGTCAGTGCCATGGCTGGCGGCTCACTTTGATATCGGTGAAAAATACATTCGC 9087 Query 10982 ACCAAGAATAAGCGTGTGACTTATTCGTTTTGTGGTTTGCGTCATAACTTAGACAGTATT 11041 ||| | | ||| |||| ||| ||| |||| | || ||||| | |||||||| Sbjct 9086 ACCCTCGACAGGCGAGTGAGCTATGTGTTCAGTGGACTTCGGCATAATCTTGACAGTATC 9027 Query 11042 AAATCTAAAGCGCGTATTTTGCTGAGTTGGGTGGATGAGGCTGAGACGGTTTCAGAAATG 11101 ||||| ||||| |||||| ||||| | ||||||||||||||||| || ||| ||||| Sbjct 9026 AAATCGAAAGCACGTATTCTGCTGTGCTGGGTGGATGAGGCTGAAACCGTTAGCGAAATA 8967 Query 11102 GCTTGG-AGAAA 11112 || ||| ||||| Sbjct 8966 GCCTGGCAGAAA 8955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138166891098636