Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20brevipalpis_20[genbank_20GCA_5F000671755.1_202014-05-08] 1,651 sequences; 315,360,362 total letters Query= NC_030909.1 Length=50183 Score E Sequences producing significant alignments: (Bits) Value seq439 140 1e-28 >seq439 Length=76666 Score = 140 bits (154), Expect = 1e-28 Identities = 276/407 (68%), Gaps = 6/407 (1%) Strand=Plus/Plus Query 30601 AACCAGGGATTGTCCGTGTAGTTCAGTTCGAC---GATCTTGGCGCCGGCCGGCATGTTT 30657 ||||| ||||| ||| ||||||||| ||| || ||| ||||| | | | | Sbjct 8806 AACCATGGATTATCCATGTAGTTCATTTCAACCGCGATAATGGCGTCATCAC---TATCC 8862 Query 30658 TTCCGGAACCGGGTGTCGGTAGGGCTGCCGTCCTTCTCCGGGTTCCAGGTGATCCAGACT 30717 || || || || | ||||| | ||| || || |||| |||||||| || | ||| ||| Sbjct 8863 TTGCGAAATCGCTTATCGGTCGCGCTACCCTCTGTCTCAGGGTTCCATGTTACCCATACT 8922 Query 30718 TCGGAGTCGCACTCGCGAACCGTCGGCACCAGCTTCTGCCAGGCGATCTCACTGACGTTC 30777 || ||| | ||| || || || || | || ||||||||||| || || || ||| | Sbjct 8923 TCAGAGCCAGGCTCTCGTACGGTGGGATCGAGTTTCTGCCAGGCTATTTCGCTAACGGTT 8982 Query 30778 TCGGCCTCATCGACCCATGCGATGAGGATGCGCGCCTTCGACTTGATGCTATCGAGGTTG 30837 || |||||||| ||||| | || || || || ||||| ||||| || || || || Sbjct 8983 TCAGCCTCATCCACCCAGCACAGCAGAATACGTGCTTTCGATTTGATACTGTCAAGATTA 9042 Query 30838 TGGCGTAGGCCGGAGAACGAGAACCACACCCGTCGGTTGCGGGTGCGGATGAACTTCTCG 30897 || || || || |||| | | ||| || | || | ||||||| ||| | || || Sbjct 9043 TGCCGAAGTCCACTGAACACATAGCTCACTCGCCTGTCGAGGGTGCGAATGTATTTTTCA 9102 Query 30898 CCGATCTCGAAGTAGGCGTTGAGCCAGGGTTCGGACCGGATCGCCTGCTTGACCTCCTCC 30957 ||||| || |||| || ||||| || | ||| | || ||| | || || |||| | Sbjct 9103 CCGATATCAAAGTGAGCCGCCAGCCATGGCACTGACTGTATTGCCAGTTTCACTTCCTGC 9162 Query 30958 ATAGAGGAGTCTTCCAGGCTGTTCATGTACTCCCGGCCGCAGAGAAT 31004 ||| || |||||||| |||||| |||| || |||| || || Sbjct 9163 ATACTCGACTCTTCCAGCGAGTTCATAAACTCACGCACGCAAAGTAT 9209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160460854002990