Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20brevipalpis_20[genbank_20GCA_5F000671755.1_202014-05-08] 1,651 sequences; 315,360,362 total letters Query= NC_030918.1 Length=36629 Score E Sequences producing significant alignments: (Bits) Value seq550 109 1e-19 >seq550 Length=29371 Score = 109 bits (120), Expect = 1e-19 Identities = 162/228 (71%), Gaps = 4/228 (2%) Strand=Plus/Minus Query 16480 CCGCCTGGATACCATCTACCAGACCAACATGCAGTCGGCCTATATGGCAGGGCGCTA--C 16537 ||| ||||| || || | | ||||| | ||||| ||||||||||| |||||||| Sbjct 14245 CCGGCTGGAGACGATTTTTCGCACCAATACCCAGTCTGCCTATATGGCCGGGCGCTATCA 14186 Query 16538 GCGGCCGCCTACGAAGCCAGGGAAACCCACCCTTACTGGATGTATGTGGCGGTGATGGAT 16597 ||||| || ||| | || | || |||||| |||||||||||||||||| Sbjct 14185 GCGGCTGC--GCGAGAACGTCGACCAGCGGCCCTACTGGCAGTATGTGGCGGTGATGGAC 14128 Query 16598 GGCGTTACCCGGCCCAGCCATGCCGCCCTGCATGGGAAAGTGTTCAGGTGGGACGATCCG 16657 || ||||| |||||||||||||| |||||||| |||||| | | |||||| || Sbjct 14127 AGCCACACCCGCCCCAGCCATGCCGCGCTGCATGGCCGGGTGTTCCGTTATGACGATGCG 14068 Query 16658 ATCTGGCAGCACATCACCCCGCCCAATGGCTACAACTGCCGGTGCCGG 16705 |||| | | | || || || |||||||||||||| |||||| Sbjct 14067 GGCTGGGATACCCTGTTTCCCCCGAACGGCTACAACTGCCGCTGCCGG 14020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117088904353842