Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20brevipalpis_20[genbank_20GCA_5F000671755.1_202014-05-08] 1,651 sequences; 315,360,362 total letters Query= NC_030929.1 Length=49033 Score E Sequences producing significant alignments: (Bits) Value seq439 223 1e-53 >seq439 Length=76666 Score = 223 bits (246), Expect = 1e-53 Identities = 413/601 (69%), Gaps = 10/601 (2%) Strand=Plus/Minus Query 8074 CGGTACCGCGGCGCCCATGGTGGACGAGGCAGTGCCAAAACGCGCACGTTCGCCAAGATG 8133 || || ||| | || | ||||| || |||||||| ||||||||||| || || ||| Sbjct 9317 CGTTATCGCTGTGCATACGGTGGGCGTGGCAGTGCAAAAACGCGCACCTTTGCGCTAATG 9258 Query 8134 ACGGCAGTAAGGGCGTA-CATGTACGCGGAGGCTG-GAATCAGTGGCGTGATCCTCGGGG 8191 | ||| || | ||| || || | | || | | || |||| |||| || || | | Sbjct 9257 ATGGCGGTTAAGGCTTATCAGGCAGCAAGAAACAGTGAGTCAG--GCGTCATACTTTGCG 9200 Query 8192 CGCGCGAGTACATGAACTCGCTTGAAGAGTCCTCCATGGAGGAAATCAAGCAGGCAATTC 8251 ||| |||| ||||||||||| |||||||| ||| ||||| | || | |||||| | Sbjct 9199 TGCGTGAGTTTATGAACTCGCTGGAAGAGTCGAGTATGCAGGAAGTGAAACTGGCAATAC 9140 Query 8252 GATCCGAGCCATGGCTGGACGCGTACTTTGACATTGGTGAGAAGTACATTCGGACCAAGA 8311 || | ||||||||||| || ||||||| || ||||| || |||||||| ||| Sbjct 9139 AGTCAGTGCCATGGCTGGCGGCTCACTTTGATATCGGTGAAAAATACATTCGCACCCTCG 9080 Query 8312 ATCGCCGAATTTCGTATGTGTTCTGCGGATTGCGCCATAACCTCGACAGCATCAAGTCGA 8371 | | ||| | ||||||||| | ||| | || ||||| || ||||| ||||| |||| Sbjct 9079 ACAGGCGAGTGAGCTATGTGTTCAGTGGACTTCGGCATAATCTTGACAGTATCAAATCGA 9020 Query 8372 AGGCCAGAATCCTGATCGCCTGGGTTGACGAGGCTGAAAACGTCAGCGAAACGGCGTGGA 8431 | || | || ||| | |||||| || |||||||||| ||| ||||||| || ||| Sbjct 9019 AAGCACGTATTCTGCTGTGCTGGGTGGATGAGGCTGAAACCGTTAGCGAAATAGCCTGGC 8960 Query 8432 TAAAGCTCCTGCCGACGGTTCGTGAGAACGACTCGGAGGTCTGGATTACCTGGAACCCGG 8491 || ||| || || || || ||| | ||| || || ||| | || |||||||| | Sbjct 8959 AGAAACTCGATCCCACCGTACGAGAGCCTGGCTCTGAAGTATGGGTAACATGGAACCCTG 8900 Query 8492 AGCGCGATGGAAGCGCCACCGACACCCGGTTCCGGAAGAACATGCCGGCAGGCGCAAAAA 8551 || || || ||||| ||||| | || || || ||| | | | | ||| | | Sbjct 8899 AGACAGAGGGTAGCGCGACCGATAAGCGATTTCGCAAGGATA---GTGATGACGCCATTA 8843 Query 8552 TC---GTCGAGATGAACTACACGGACAATCCGTGGTTTCCCGATGTGCTCGATCAGGAGC 8608 || || || |||||||||| ||| ||||| ||||||| | |||||| || || | | Sbjct 8842 TCGCGGTTGAAATGAACTACATGGATAATCCATGGTTTCACAGTGTGCTTGAGCAAGTGA 8783 Query 8609 GCCTGAACGACCGGCAGACGCTGGACGACCAGACCTATGCCTGGATCTGGGATGGCGCCT 8668 | | | |||| | | ||| ||| |||||||||||||| ||||| ||||| | Sbjct 8782 GGCAGCGGGACCTCCGTATGCTTGACTCGGCAACCTATGCCTGGATTTGGGAAGGCGCGT 8723 Query 8669 A 8669 | Sbjct 8722 A 8722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156780926151690