Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20brevipalpis_20[genbank_20GCA_5F000671755.1_202014-05-08] 1,651 sequences; 315,360,362 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq18 120 4e-22 seq54 116 5e-21 >seq18 Length=2944136 Score = 120 bits (132), Expect = 4e-22 Identities = 200/286 (70%), Gaps = 6/286 (2%) Strand=Plus/Plus Query 156165 AACAATCGTCTGACGTTAGCTTCCGATTCACCCACATATTTGTTTAATAATTCAGGACCG 156224 ||||| ||||| | |||||||||||||| || |||||||||| ||| | | |||||| Sbjct 566368 AACAACCGTCTTATATTAGCTTCCGATTCGCCTACATATTTGTCTAAAACCTGAGGACCA 566427 Query 156225 TTAACTATTTTGACGGGTCGTGA---TTTAAAAGCTTGAGCGATACAGCGAGCCATTAAT 156281 || |||||||| || || || || | | ||| | || || ||||| | Sbjct 566428 TTTACTATTTTT--GGCTCACGAGCGTTCAGCATATTGC-CTATCTGACGTGCCATCAGA 566484 Query 156282 GTTTTACCGCACCCAGGAGGTCCGTATAACAATACTCCTTTTATATGTTTACAACCTAAT 156341 |||||||| ||||||||||| || | || | ||||| | ||| || ||||| ||| Sbjct 566485 GTTTTACCTGTGCCAGGAGGTCCATAGAGTAAAATACCTTTGACATGCTTGCAACCCAAT 566544 Query 156342 TTTTCAGTTATTTCTACCGGAACTGATCTGGAAGCAAATGCTCTTCGAAAAATGAGAGAA 156401 | |||| | ||| |||| | ||| |||||||| || | || ||||| | Sbjct 566545 TGTTCAACCACTTCCGGAGGAAATACTCTTGAAGCAAAAGCACGACGGAAAATAGCATTG 566604 Query 156402 AATTCTTTATCCAATCCCCCCACACCCATTTCCTCAAAATTCCAAT 156447 |||||||||||||| || || | |||||||| |||||| ||||| Sbjct 566605 AATTCTTTATCCAAGCCGCCAATACCCATTTTGCCAAAATCCCAAT 566650 >seq54 Length=1370671 Score = 116 bits (128), Expect = 5e-21 Identities = 231/338 (68%), Gaps = 8/338 (2%) Strand=Plus/Plus Query 50473 AAGGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGCGCGTTACATAA 50532 |||| || |||||||| |||| |||||||| ||| ||||||||||||||| || | || Sbjct 1326938 AAGGTGACTTAGGACCCATTTATGGTTTTCAGTGGCGACATTTTGGAGCGCAATATAGAA 1326997 Query 50533 ATTGCGACGTAAATTACG--AAGGTCAAGGCGTGGATCAACTGCAAAAAATTATAACGAC 50590 ||| ||| |||||| | | || |||| || || ||| | |||| || || | || Sbjct 1326998 CTTGTCACGAAAATTATGGTACGG--AAGGGGTCGACCAATTAAAAAACATCATTAGAAC 1327055 Query 50591 GTTGAAAACAAACCCCGACGATCGGCGTAT--TTTAATGACCGCCTGGAATCCAACCGAT 50648 | | ||||| || ||||| ||||| ||| || || | |||||||| ||| Sbjct 1327056 AATAACGACAAATCCTACAGATCGACGTATGATTTTAT--CCTCTTGGAATCCGGTAGAT 1327113 Query 50649 ATAGATCAAACCGTTTTACCTCCGTGTCATGTTTTATGTCAATTTTATGCCACAGACAAT 50708 ||| ||| | |||||| || |||||| || ||||||||||| | | ||| Sbjct 1327114 ATACCAAAAATGGCTTTACCACCCTGTCATTGCTTGGCTCAATTTTATGTGGCCAATAAT 1327173 Query 50709 GTTTTATCCTGTCAATGTTATCAAAGATCAGCTGATATGGGTTTAGGCGTTCCTTTCAAC 50768 | || | ||| ||| ||||||| | || |||||||| || || || || || || Sbjct 1327174 GAATTGTGCTGCCAACTTTATCAACGTAGTGCAGATATGGGCTTGGGTGTCCCCTTTAAT 1327233 Query 50769 GTAGCTTCTTACGCTTTATTAACGTATTTGATCGCTCA 50806 |||| || || || | |||||| | |||| || || Sbjct 1327234 ATAGCCTCGTATGCCCTCTTAACGAACATGATTGCACA 1327271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667061433235560