Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014 -05-08] 2,395 sequences; 374,774,708 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq477 113 4e-20 >seq477 Length=240241 Score = 113 bits (124), Expect = 4e-20 Identities = 188/271 (69%), Gaps = 3/271 (1%) Strand=Plus/Plus Query 20400 AATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAA---TAATGAATT 20456 |||||| ||||| |||||||||| || |||||||| ||| | || |||| |||| Sbjct 223760 AATGGCGTTGCCGCCATGTCATACTTTAATGCAATTTTATGTTTCAAAAGATAATAAATT 223819 Query 20457 GTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGC 20516 |||||| |||||||||| |||||| | | ||||||||||| |||||||| Sbjct 223820 AAGTTGTCAATTGTATCAACGTAGTGCTGATGTTTTTTTAGGTGTTCCTTTTAATATTGC 223879 Query 20517 AAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTGACTT 20576 ||||||| || || | || || | ||||| || ||| ||| ||| || ||||| || Sbjct 223880 AAGTTATTCGTTGTTAACTCATTTAATTGCGCAAGTTTCAGGATTAGAAGTTGGTGATTT 223939 Query 20577 AGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAAATTACA 20636 || |||| ||||||| |||||||| || ||| | || | || ||| Sbjct 223940 TGTTTACACATTAGGAGATTGCCATATTTATAAAAACCATTTTACACAAGTTAATGAACA 223999 Query 20637 GTTAACACGACAACCAAAACAATTCCCAACT 20667 ||||||| || |||| |||| |||||| Sbjct 224000 GTTAACAAGAACACCACGCAAATTACCAACT 224030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399172348193275