Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014 -05-08] 2,395 sequences; 374,774,708 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq357 262 4e-65 >seq357 Length=326794 Score = 262 bits (290), Expect = 4e-65 Identities = 500/733 (68%), Gaps = 4/733 (1%) Strand=Plus/Plus Query 13452 TGACATAAAC--ACTTTATCACAAC-CTAGTTCTAATAATAATCTATCAGCAATAAACTC 13508 ||| |||||| || || || || | ||||||||||||| || | ||| |||| | | || Sbjct 32015 TGAAATAAACTTACCTT-TCCCACCTCTAGTTCTAATAACAAACGATCGGCAACATATTC 32073 Query 13509 AATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTATATTAGT 13568 ||||||| | |||| || | ||||| || |||| | || || | | || Sbjct 32074 TATATATTTACACATACTTTCGCTGTTCATGCCAATTAAGTCGACTGGTAAGGCCTCTGT 32133 Query 13569 TAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAATCTTAATAATGTCATTAGA 13628 ||||| |||||||| || || || || |||| || | ||| || || Sbjct 32134 CAAAAACTCTTTTTCAATTTTAACGGCATCTGTTATTATTTCCAAAATCCGTTCTTTGCT 32193 Query 13629 AGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATC 13688 || | | | | ||||||||| ||||| |||||| ||||| || | ||| ||||| Sbjct 32194 CGGTTTTTGTATCAAATGTTTAAACATTAATACCGCAAATTCACAGTGCAAGCCTTCATC 32253 Query 13689 TCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCA 13748 | || | ||| || || || ||||| |||||||| | ||| ||||| |||| ||| Sbjct 32254 GCGTGATATCATTTCATTAGAGAACGTTAAACCTGGCATTATTCCACGTTTCTTTAGCCA 32313 Query 13749 AAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAG 13808 |||||| | |||||| || ||||||||| || || || ||||| || ||||| | Sbjct 32314 AAATATCGAAGCGAAGCTCCCACTAAAGAATATACCTTCGACGGCAGCGAAAGCTATAAC 32373 Query 13809 TCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTCAGAtttttt 13868 ||||| || || || | ||||||||| | |||||||| | || || Sbjct 32374 ACGTTCACCGAAATTAGCCGAATGCGATGATATCCAAGCTAGTGCCCATTCCGCCTTCTT 32433 Query 13869 tttAATAAAATCCATTGTTTCGATTGCATTGAATAAATGTTCCTTCTCTTTAGTACTTGA 13928 |||| || |||||| || || ||||| |||| || |||||| ||||| | | Sbjct 32434 CTTAACCAATGGCATTGTCTCAATGGCATTAAATAGATATTCCTTTTCTTTCTCATCTCT 32493 Query 13929 AATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTG 13988 || ||||| || |||||||| ||||||||||| ||||||| ||||| || || || || Sbjct 32494 GATATATGTTTCGATAAGTAAACTATACATTTCCGAGTGTACATTTTCCATGGCAATTTG 32553 Query 13989 AAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAA 14048 ||| |||||||| || | ||||| | ||| ||||| | |||||| ||| | || Sbjct 32554 AAACCCATAAAAGCAACGTGCTTCGGTTATTTGAACCTCTTGGGAAAATCGTTCCACTAA 32613 Query 14049 GTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTA 14108 || ||||||||||||||||| || |||||||| ||||| | || | |||||| | Sbjct 32614 ATTCTCATTAACAATACCATCGGATGCCGCAAAAAAAGCCAAAACGTGTGAAATAAAATG 32673 Query 14109 TTGCTCTTCATTGTTGAGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATC 14168 | || |||| | | ||||||||| | | ||| ||||| || || ||||| || Sbjct 32674 ACGTTCGCCATTACTTAACCGATTCCAATCGTCGATATCTTTAGAGAGGTCAACTTCTTC 32733 Query 14169 AACTGTCCaaaaa 14181 | ||||||||| Sbjct 32734 TGCAGTCCAAAAA 32746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478574472247800