Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014 -05-08] 2,395 sequences; 374,774,708 total letters Query= NC_006949.1 Length=46900 Score E Sequences producing significant alignments: (Bits) Value seq1006 114 4e-21 >seq1006 Length=36943 Score = 114 bits (126), Expect = 4e-21 Identities = 158/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 32903 CCAAGCATTTGCATGGTTCCACTAACGCCAACGATGACTTCGGTAGTGAACCGATTCTGT 32962 || ||||||||||| | ||| ||| ||| || || ||||| ||| | || || || Sbjct 10302 CCGAGCATTTGCATAGCACCATTAATGCCTACAATAACTTCTGTAATATACTTATCTTGA 10243 Query 32963 CCACTTTGGTCCTGCCATTTTCTTGTCCGCAATTTGCCTTCAAGATAAACCTCAGAGCCT 33022 ||| ||||||| |||||||||||||| | || | ||||| | ||| || | ||| ||| Sbjct 10242 CCATTTTGGTCTTGCCATTTTCTTGTTTGTAAGCTCCCTTCGATATATACTTGAGATCCT 10183 Query 33023 TTTCGCAGATACTCGCTGGCAATTTCTGCCAGTTTCCCGCTCATCACCACACGGTGCCAC 33082 ||||| | ||| || | ||| ||||| || | ||| || || || || | |||||| Sbjct 10182 TTTCGTAAATATTCTCCGGCTATTTCAGCTAATTTTCCAAAAATAACTACTCTGTGCCAT 10123 Query 33083 TCCGTCTGCTCCTTTTGCTCGCCAGTATTTTTATCTCGCCA 33123 || || | || || || || ||||||||||| ||||| Sbjct 10122 TCGGTTTTTTCTTTGATTTCTCCGGTATTTTTATCGCGCCA 10082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149954135089380