Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014 -05-08] 2,395 sequences; 374,774,708 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq357 217 2e-51 >seq357 Length=326794 Score = 217 bits (240), Expect = 2e-51 Identities = 474/709 (67%), Gaps = 10/709 (1%) Strand=Plus/Plus Query 21293 AGTTCTGATAATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTC 21352 |||||| |||| || | ||| || ||| |||||||||||| |||||| ||| | ||| Sbjct 32042 AGTTCTAATAACAAACGATCGGCAACATATTCTATATATTTACACATACTTTCGCTGTTC 32101 Query 21353 ATACCGATCAATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCT 21412 || || || || | || || | || | ||||||||| |||||| || ||||| Sbjct 32102 ATGCCAATTAAGTCGACTGGTAAGGCCTCTGTCAAAAACTCTTTTTCAATTTTAACGGCA 32161 Query 21413 TCAACAATTATATTTATTATCCTAGATGTACTAGGGGGATACAATAATTGTTTAAACATC 21472 || ||||| | | |||| | | || || | | || ||||||||||| Sbjct 32162 TCTGTTATTATTTCCAAAATCCGTTCTTTGCTCGGTTTTTGTATCAAATGTTTAAACATT 32221 Query 21473 AAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTT 21532 || ||||| ||||| ||||| |||||||| | ||| | ||||||||| || ||| Sbjct 32222 AATACCGCAAATTCACAGTGCAAGCCTTCATCGCGTGATATCATTTCATTAGAGAACGTT 32281 Query 21533 AAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCT-CCTGAAAA 21591 ||||| ||||||| ||| | || |||| ||||||||| || || || ||| || ||| Sbjct 32282 AAACCTGGCATTATTCCACGTTTCTTTAGCCAAAATATCGAAGCGAA-GCTCCCACTAAA 32340 Query 21592 GAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATC 21651 ||| || || || |||||||| || || | | ||||||||| | ||| | || Sbjct 32341 GAATATACCTTCGACGGCAGCGAAAGCTATAACACGTTCACCGAAATTAG---CCGAATG 32397 Query 21652 C---AATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAAT-CAATTGTATCAA 21707 | ||||||| | |||||||| ||||| | |||| |||| ||||| |||| Sbjct 32398 CGATGATATCCAAGCTAGTGCCCATTCCGCCTTCTTCTTAA-CCAATGGCATTGTCTCAA 32456 Query 21708 TAGCTTTTAAAAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNAC 21767 | || || || |||| | ||||| | |||| | || || Sbjct 32457 TGGCATTAAATAGATATTCCTTTTCTTTCTCATCTCTGATATATGTTTCGATAAGTAAAC 32516 Query 21768 TATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCT 21827 |||||||||| || |||| |||||| || || || ||||| || ||||| || | ||| | Sbjct 32517 TATACATTTCCGAGTGTACATTTTCCATGGCAATTTGAAACCCATAAAAGCAACGTGCTT 32576 Query 21828 CTGAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCAC 21887 | | ||||||||| ||||||||| | || || ||||| || || ||||| Sbjct 32577 CGGTTATTTGAACCTCTTGGGAAAATCGTTCCACTAAATTCTCATTAACAATACCATCGG 32636 Query 21888 TGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAATTTTT 21947 || |||||||| ||||| | | | ||||||| |||||| || |||| | Sbjct 32637 ATGCCGCAAAAAAAGCCAAAACGTGTGAAATAAAATGACGTTCGCCATTACTTAACCGAT 32696 Query 21948 TCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAA 21996 ||||||| | |||||| || | || |||||||| | |||||||| Sbjct 32697 TCCAATCGTCGATATCTTTAGAGAGGTCAACTTCTTCTGCAGTCCAAAA 32745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531884876219800