Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014 -05-08] 2,395 sequences; 374,774,708 total letters Query= NC_007022.1 Length=172963 Score E Sequences producing significant alignments: (Bits) Value seq1006 118 1e-21 >seq1006 Length=36943 Score = 118 bits (130), Expect = 1e-21 Identities = 208/299 (70%), Gaps = 3/299 (1%) Strand=Plus/Plus Query 6926 CCATGTGTTAAATGACCACCGCAATCCAAAGACATCGCCAATACTGAATCGCCTGGACTC 6985 ||||| |||||||| |||||| | ||| |||| | ||||||| ||| ||||| | Sbjct 11361 CCATGCGTTAAATGCCCACCGTGTTTTAAATCCATCCCTAATACTGTATCTCCTGGTTTG 11420 Query 6986 AGCAACGCATGGTAAACAGCTTGGTTTGCCTGTGAACCGGAATGGGGTTGAACGTTTGCG 7045 || | ||| || || || |||||||||||||| ||||| ||||| || || || Sbjct 11421 AGTAGTGCAGAATATACGGCGAAATTTGCCTGTGAACCTGAATGCGGTTGTACATTAGCA 11480 Query 7046 AAAT-TGCAACTAAACAGTTCTTTAGCACGCTCAATTGCCAGGTTCTCGATCTCATCGGC 7104 ||| ||| | |||| | |||||| || | |||||| | || || || | ||| Sbjct 11481 TAATCTGC-ATTAAATAAAGATTTAGCTCGTTTAATTGCTAAATTTTCAATTTTATCTAT 11539 Query 7105 TTTTACACAACCGCCGTAATACCGTTTGCCTGGATATCCCTCAGCATACTTGTTGGTAAA 7164 | | |||| || || ||||| | ||| ||||||||| |||||||| || || || || Sbjct 11540 ATGTGCACATCCTCCATAATATCTTTTATTTGGATATCCTTCAGCATATTTATTAGTTAA 11599 Query 7165 AATAGAACCTTGCGCTTTCATAACATCATCGGACACATAGTTTTCGGATGCAATCAAGC 7223 | |||||||| | ||| |||| | ||||| ||||| |||||||| |||| Sbjct 11600 TAATGAACCTTGAAGATACATCACATATTTACTAACATAATTTTCAGATGCAAT-AAGC 11657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 553337033976600