Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014
-05-08] 2,395 sequences; 374,774,708 total letters
Query= NC_007052.1
Length=45861
Score E
Sequences producing significant alignments: (Bits) Value
seq899 381 2e-101
>seq899
Length=65883
Score = 381 bits (422), Expect = 2e-101
Identities = 676/966 (70%), Gaps = 30/966 (3%)
Strand=Plus/Plus
Query 25919 AATAACATAATCTACAGTACGTAATGATTTCAAGTCTTTTCCACCGGCATATGAAATTGA 25978
|||||||||||| || | | || | ||| ||||| ||||| ||||| ||||||||
Sbjct 7503 AATAACATAATCAACTTTTTTAATTGCGTCCAAATCTTTGCCACCAGCATAAGAAATTGA 7562
Query 25979 GCTTTGTAAATCTTGTTGCATTTCTTTTAAGGTATCCATTAATG--ACCCCTTATGTTCT 26036
||||||||||| ||||||| | ||| || | |||| ||| | || |||
Sbjct 7563 TGATTGTAAATCTTCAGTCATTTCTCGAAGGGTTTCAAA-AATGCTACCACGAAT-TTCA 7620
Query 26037 ACAAACAtttttttACCTTCTACATTTTTATGTTCGCCTTTT-TGAAATTCAGATGCACT 26095
| || |||||| ||||| |||| | ||| |||||| | ||||| ||
Sbjct 7621 ATTAATTCTTTTTTTCCTTCAACATAGCGTTTTTCCCCTTTTATTGTATTCACTGGCCGA 7680
Query 26096 ACCAAAATATTCTTTATACTGTTTACCATCAAGTTCTACAGTTTCACCAGGTGATTCTTC 26155
||||| ||||||||||| | |||||||| ||| || || || ||||||||||
Sbjct 7681 TCCAAAGTATTCTTTATATTTAACACCATCAATTTCAACCTGTTTTCCGGGTGATTCTTG 7740
Query 26156 GTGTGCCGCAAATAATGAACCAATCATGACCATTGATGCACCAAATCTAATTGACTTAGC 26215
||| || |||||||| ||||| ||| ||||| || || | | |||||| |||||
Sbjct 7741 GTGGGCAGCAAATAAACTACCAACCATACACATTGTGGCTCCCATCCGAATTGATTTAGC 7800
Query 26216 GATGTCGCCATGCGTTCTTATGCCACCATCGGCAATCAAAGGTTTACGAGC-TGCTTTAC 26274
||||| || | | || |||||||| ||||| | ||||| |||| | ||||||
Sbjct 7801 AATGTCACCGTTAACGCGTAATCCACCATCAGCAATAATTGGTTT-TGAGCTTCCTTTAC 7859
Query 26275 TACATATGTTTAATGCCGCTAACTGCCAACCACCAGTACCAAAACCTGTTTTAATCTTTG 26334
| ||| || | |||| || || || |||||| | ||||| |||||||| | || |
Sbjct 7860 TGCATCATTTAACAGCCGAGAATTGTCAGCCACCATTTCCAAATCCTGTTTTTAGTTTGG 7919
Query 26335 TAATACAAACTCTACCAGGACCTATACCGACTTTGGTAGCATCAGCACCAGCATT-TTCT 26393
||||||| ||| | || || || || || |||||||| ||||||||||| |||| |||
Sbjct 7920 TAATACATACTTTTCCTGGTCCAATTCCAACTTTGGTTGCATCAGCACC-TCATTGTTCC 7978
Query 26394 AATTCTCTAACACCTTCTGGCGTACCAACATTACCAGCAATAACAAAACTATCAGG---T 26450
|| || | ||| || ||| || |||||||| || ||||||| ||| | || | |
Sbjct 7979 AAATCACGAACTGTTTTTGGTGTTCCAACATTTCCGGCAATAATAAAGGTTTCGTGGCCT 8038
Query 26451 ATATGGGTTTTAATATGTTTAATCA--TGTTTATCACTGAATCTGAGTGACCATGCGCAA 26508
| |||||| ||||||| |||| | |||| |||| || | || ||||| ||||
Sbjct 8039 AAATGGGTGCGGATATGTTCGATCATTTTTTTAACACTAAA--GGTATGGCCATGAGCAA 8096
Query 26509 TATCTATTGTAATATATTCGGGGATTAATTTTTCTTGAGCTAACTTTTCAATAAAATCAA 26568
| || ||||||||||| ||||| ||||| | ||||| ||| ||||||| || ||||
Sbjct 8097 TGTCGATTGTAATATAATCGGGAATTAACTGTTCTTTTTTTAATGTTTCAATTAATTCAA 8156
Query 26569 ATTCCGCTTTCTTTACACCAACTGAAATAGATGCAAATAAGCCTGAATTTTGCATATGTT 26628
| || | || || ||||||||||| || | || |||| | | ||| ||||||||
Sbjct 8157 AATCATTTGGTTTAACTCCAACTGAAATCGAAGTAATTAAGTTTTTACTTTTCATATGTT 8216
Query 26629 TTATAAAAGGTATTCTTGCTTCTTCATCAAAACGATGCATGATATAAAAGTAATCATTTT 26688
| ||||| | |||| || ||| ||| |||||||| || |||||||| | ||||
Sbjct 8217 TAATAAA--TTTAACTTG-ATCAACATTAAACCGATGCATAATGTAAAAGTAGTTTTTTT 8273
Query 26689 CAGCAAACCATTTCGC-TAATTTCTCATTCATAACTGTTTGCATATTTGCAGGAACTACA 26747
|||| | |||||| ||||| ||||| | |||||| |||||||| || || |||
Sbjct 8274 CAGC-TAGTTTTTCGCATAATTCTTCATTTACCACTGTTGCCATATTTGATGGCACAACA 8332
Query 26748 GGTAGCTT----GAATTTTTTCGGACCAAATTGGATAGTTGTATCACATTCTGATCTACT 26803
|||| || | || |||| || | || | ||||||||||||||| || |
Sbjct 8333 GGTAAATTAAAAGTATGTTTT----CCTAGTTTAACGGTTGTATCACATTCTTTTCGAGA 8388
Query 26804 CTCAACTATACATTTATTAGGTATTAATTGAATATCTTCATAGTCAAATATTTTCA-TTT 26862
||||| | |||| | || ||||||||||| |||||||| |||||| ||||| | |
Sbjct 8389 ATCAACAACACATAATTCTGGAATTAATTGAATGTCTTCATAATCAAATGCTTTCACTAT 8448
Query 26863 TTATTT 26868
||||||
Sbjct 8449 TTATTT 8454
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 146629429648770
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |