Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014 -05-08] 2,395 sequences; 374,774,708 total letters Query= NC_007052.1 Length=45861 Score E Sequences producing significant alignments: (Bits) Value seq899 381 2e-101 >seq899 Length=65883 Score = 381 bits (422), Expect = 2e-101 Identities = 676/966 (70%), Gaps = 30/966 (3%) Strand=Plus/Plus Query 25919 AATAACATAATCTACAGTACGTAATGATTTCAAGTCTTTTCCACCGGCATATGAAATTGA 25978 |||||||||||| || | | || | ||| ||||| ||||| ||||| |||||||| Sbjct 7503 AATAACATAATCAACTTTTTTAATTGCGTCCAAATCTTTGCCACCAGCATAAGAAATTGA 7562 Query 25979 GCTTTGTAAATCTTGTTGCATTTCTTTTAAGGTATCCATTAATG--ACCCCTTATGTTCT 26036 ||||||||||| ||||||| | ||| || | |||| ||| | || ||| Sbjct 7563 TGATTGTAAATCTTCAGTCATTTCTCGAAGGGTTTCAAA-AATGCTACCACGAAT-TTCA 7620 Query 26037 ACAAACAtttttttACCTTCTACATTTTTATGTTCGCCTTTT-TGAAATTCAGATGCACT 26095 | || |||||| ||||| |||| | ||| |||||| | ||||| || Sbjct 7621 ATTAATTCTTTTTTTCCTTCAACATAGCGTTTTTCCCCTTTTATTGTATTCACTGGCCGA 7680 Query 26096 ACCAAAATATTCTTTATACTGTTTACCATCAAGTTCTACAGTTTCACCAGGTGATTCTTC 26155 ||||| ||||||||||| | |||||||| ||| || || || |||||||||| Sbjct 7681 TCCAAAGTATTCTTTATATTTAACACCATCAATTTCAACCTGTTTTCCGGGTGATTCTTG 7740 Query 26156 GTGTGCCGCAAATAATGAACCAATCATGACCATTGATGCACCAAATCTAATTGACTTAGC 26215 ||| || |||||||| ||||| ||| ||||| || || | | |||||| ||||| Sbjct 7741 GTGGGCAGCAAATAAACTACCAACCATACACATTGTGGCTCCCATCCGAATTGATTTAGC 7800 Query 26216 GATGTCGCCATGCGTTCTTATGCCACCATCGGCAATCAAAGGTTTACGAGC-TGCTTTAC 26274 ||||| || | | || |||||||| ||||| | ||||| |||| | |||||| Sbjct 7801 AATGTCACCGTTAACGCGTAATCCACCATCAGCAATAATTGGTTT-TGAGCTTCCTTTAC 7859 Query 26275 TACATATGTTTAATGCCGCTAACTGCCAACCACCAGTACCAAAACCTGTTTTAATCTTTG 26334 | ||| || | |||| || || || |||||| | ||||| |||||||| | || | Sbjct 7860 TGCATCATTTAACAGCCGAGAATTGTCAGCCACCATTTCCAAATCCTGTTTTTAGTTTGG 7919 Query 26335 TAATACAAACTCTACCAGGACCTATACCGACTTTGGTAGCATCAGCACCAGCATT-TTCT 26393 ||||||| ||| | || || || || || |||||||| ||||||||||| |||| ||| Sbjct 7920 TAATACATACTTTTCCTGGTCCAATTCCAACTTTGGTTGCATCAGCACC-TCATTGTTCC 7978 Query 26394 AATTCTCTAACACCTTCTGGCGTACCAACATTACCAGCAATAACAAAACTATCAGG---T 26450 || || | ||| || ||| || |||||||| || ||||||| ||| | || | | Sbjct 7979 AAATCACGAACTGTTTTTGGTGTTCCAACATTTCCGGCAATAATAAAGGTTTCGTGGCCT 8038 Query 26451 ATATGGGTTTTAATATGTTTAATCA--TGTTTATCACTGAATCTGAGTGACCATGCGCAA 26508 | |||||| ||||||| |||| | |||| |||| || | || ||||| |||| Sbjct 8039 AAATGGGTGCGGATATGTTCGATCATTTTTTTAACACTAAA--GGTATGGCCATGAGCAA 8096 Query 26509 TATCTATTGTAATATATTCGGGGATTAATTTTTCTTGAGCTAACTTTTCAATAAAATCAA 26568 | || ||||||||||| ||||| ||||| | ||||| ||| ||||||| || |||| Sbjct 8097 TGTCGATTGTAATATAATCGGGAATTAACTGTTCTTTTTTTAATGTTTCAATTAATTCAA 8156 Query 26569 ATTCCGCTTTCTTTACACCAACTGAAATAGATGCAAATAAGCCTGAATTTTGCATATGTT 26628 | || | || || ||||||||||| || | || |||| | | ||| |||||||| Sbjct 8157 AATCATTTGGTTTAACTCCAACTGAAATCGAAGTAATTAAGTTTTTACTTTTCATATGTT 8216 Query 26629 TTATAAAAGGTATTCTTGCTTCTTCATCAAAACGATGCATGATATAAAAGTAATCATTTT 26688 | ||||| | |||| || ||| ||| |||||||| || |||||||| | |||| Sbjct 8217 TAATAAA--TTTAACTTG-ATCAACATTAAACCGATGCATAATGTAAAAGTAGTTTTTTT 8273 Query 26689 CAGCAAACCATTTCGC-TAATTTCTCATTCATAACTGTTTGCATATTTGCAGGAACTACA 26747 |||| | |||||| ||||| ||||| | |||||| |||||||| || || ||| Sbjct 8274 CAGC-TAGTTTTTCGCATAATTCTTCATTTACCACTGTTGCCATATTTGATGGCACAACA 8332 Query 26748 GGTAGCTT----GAATTTTTTCGGACCAAATTGGATAGTTGTATCACATTCTGATCTACT 26803 |||| || | || |||| || | || | ||||||||||||||| || | Sbjct 8333 GGTAAATTAAAAGTATGTTTT----CCTAGTTTAACGGTTGTATCACATTCTTTTCGAGA 8388 Query 26804 CTCAACTATACATTTATTAGGTATTAATTGAATATCTTCATAGTCAAATATTTTCA-TTT 26862 ||||| | |||| | || ||||||||||| |||||||| |||||| ||||| | | Sbjct 8389 ATCAACAACACATAATTCTGGAATTAATTGAATGTCTTCATAATCAAATGCTTTCACTAT 8448 Query 26863 TTATTT 26868 |||||| Sbjct 8449 TTATTT 8454 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146629429648770