Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014 -05-08] 2,395 sequences; 374,774,708 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq477 91.5 4e-13 >seq477 Length=240241 Score = 91.5 bits (100), Expect = 4e-13 Identities = 141/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 111604 AAATTAAGAAC-AACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGCA 111662 || |||| ||| || ||| ||| |||||| |||| | ||||| ||||| ||| || | Sbjct 223692 AATTTAAAAACTAATCCATATTCACGTCGCCATATTGTTAGTGCTTGGAATCCAGCTGAA 223751 Query 111663 TTGGAAAAAATGGCACTTCCACCATGTCAT-CTTATGTGCCAGTTTTATGTA-CACGACG 111720 | ||||||||||| | || ||||||||| ||| ||| | |||||||| || | Sbjct 223752 ATTGAAAAAATGGCGTTGCCGCCATGTCATACTTTAATGCAA-TTTTATGTTTCAAAAGA 223810 Query 111721 GGATGCTTTCA--TGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTT 111778 || || | || ||| ||||||| || ||||||| || | | |||||||| || Sbjct 223811 TAATAAATTAAGTTGTCAATTGTATCAACGTAGTGCTGATGTTTTTTTAGGTGTTCCTTT 223870 Query 111779 TAATATTGCAAGTTA 111793 ||||||||||||||| Sbjct 223871 TAATATTGCAAGTTA 223885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303313605372890