Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014 -05-08] 2,395 sequences; 374,774,708 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq47 96.9 3e-15 >seq47 Length=1194842 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 20180 ATATGCGTTTTGTAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGA 20239 |||||||||||||| ||||| | ||| || ||||| |||||||| || ||| |||| Sbjct 1117549 ATATGCGTTTTGTAAATGTGCGTATCACCGGTAGTGTGTATAAACTCGCCTGGTTTAAGG 1117490 Query 20240 CCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACT 20299 || || | ||| |||| |||| | ||||| | | ||| || || ||||| || || Sbjct 1117489 CCGGTTAAATGGGCAATCATACACGTTAATAATGCATACGATGCTATATTAAATGGGACA 1117430 Query 20300 CCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACA 20359 |||| ||||| || | | |||||| || ||||| || | |||| | | |||| Sbjct 1117429 CCCAGCCCCATATCGGCACTGCGCTGATAAAGTTGACATGACAACTCATTATTGGATACA 1117370 Query 20360 TAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCAT 20397 || ||||| || | || |||||||| | ||||| Sbjct 1117369 TAGAATTGGGCCAAGCAATGGCAGGGCGGTAAGGCCAT 1117332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441359586401800