Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014 -05-08] 2,395 sequences; 374,774,708 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq630 86.0 5e-12 seq530 86.0 5e-12 >seq630 Length=172243 Score = 86.0 bits (94), Expect = 5e-12 Identities = 69/82 (84%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 115539 GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACCAAAACTGAT 115597 ||||||||||||| || |||||||| ||||||| | |||||||||||||| ||||||| Sbjct 20421 GCTCTAGAATTACTACAGTTATCCAGGTAACTGTTAACGATCTAAGGAACCATAACTGAT 20362 Query 115598 ATATTGAGCCATTCGTGGTATC 115619 ||| |||||| || | ||| || Sbjct 20361 ATAATGAGCCTTTTGCGGTTTC 20340 Score = 86.0 bits (94), Expect = 5e-12 Identities = 69/82 (84%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 114342 GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACCAAAACTGAT 114400 ||||||||||||| || |||||||| ||||||| | |||||||||||||| ||||||| Sbjct 20421 GCTCTAGAATTACTACAGTTATCCAGGTAACTGTTAACGATCTAAGGAACCATAACTGAT 20362 Query 114401 ATATTGAGCCATTCGTGGTATC 114422 ||| |||||| || | ||| || Sbjct 20361 ATAATGAGCCTTTTGCGGTTTC 20340 >seq530 Length=221004 Score = 86.0 bits (94), Expect = 5e-12 Identities = 69/81 (85%), Gaps = 2/81 (2%) Strand=Plus/Plus Query 114335 ATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACCA 114392 || |||| |||||||||||||||| |||||||||||||||| | |||||||||||||| Sbjct 134003 ATATATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAAGGAACCA 134062 Query 114393 AAACTGATATATTGAGCCATT 114413 |||| |||| |||||| || Sbjct 134063 TAACTTATATGATGAGCCTTT 134083 Score = 86.0 bits (94), Expect = 5e-12 Identities = 69/81 (85%), Gaps = 2/81 (2%) Strand=Plus/Plus Query 115532 ATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACCA 115589 || |||| |||||||||||||||| |||||||||||||||| | |||||||||||||| Sbjct 134003 ATATATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAAGGAACCA 134062 Query 115590 AAACTGATATATTGAGCCATT 115610 |||| |||| |||||| || Sbjct 134063 TAACTTATATGATGAGCCTTT 134083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397050810120790