Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014 -05-08] 2,395 sequences; 374,774,708 total letters Query= NC_009816.1 Length=70579 Score E Sequences producing significant alignments: (Bits) Value seq1077 86.0 3e-12 >seq1077 Length=25268 Score = 86.0 bits (94), Expect = 3e-12 Identities = 276/426 (65%), Gaps = 2/426 (0%) Strand=Plus/Minus Query 59910 TCATCGAACATAAGGTAAGGATAGCCAGACTCAAACTGAACCTCTGCGATGGTCTGGAAC 59969 || || ||||||| || ||||| || || ||||| |||| || || | | || || Sbjct 15119 TCTTCAAACATAATATATGGATACCCGGATTCAAATTGAATTTCAGCTAATTTTTGAAAA 15060 Query 59970 AGCTTTCGAGCGTCGATAAAGGTCTTAGCGATCCTATCATCTTTTAGCCACGTGTCGTAC 60029 | ||||||||| ||| || || || | | ||||| || | ||| |||| Sbjct 15059 AAACTTCGAGCGTTGATGGCAGTTTTGCTAATGCGTTTATCTTGTAATAAATTGTGGTAC 15000 Query 60030 ATCTCGGTTACGGAGAACTCGGACAGTGACTTTCCGTACACCTTATTGATGTCATAAGGA 60089 | ||| | | || || || | || || || || || | || ||||| ||| Sbjct 14999 AAATCGCTGATAACTAATTCTGAAAATGGCTGATTATAAACTTTTTCAATATCATATGGA 14940 Query 60090 GAGAATAGGGCCATAGGCTCGCT-CTCCTTGGCAAGGCGGAACGTGACATCAGGAACGAT 60148 || |||| ||| |||| | ||| || || | | || || | ||| |||| || Sbjct 14939 GAAAATAAATACATTT-CTCGATTCTCTTTTGCTAATTGAAATGTAATATCTGGAATAAT 14881 Query 60149 AACTCCTAGGGAGAGAGTCTTAATACGGATCTTCTCGTCGGCGTTTTCACGCTTGGTATC 60208 ||||||| || | ||| || || | || || || ||||||||||| ||||||||| Sbjct 14880 TACTCCTAAAGATAAAGTTTTTATTCTAATTTTTTCATCGGCGTTTTCTTTCTTGGTATC 14821 Query 60209 CAGGAACGCAAGGATGTCGGGGTGGTGTGCGTTCAAATATACCGCCCCTGCGCCCTGCCT 60268 | ||| | || || || || || || | || ||||| | ||||| || || | Sbjct 14820 TAAAAACTTTAAAATATCTGGATGATGAGCATGTAAGTATACAGAGCCTGCTCCTTGTCG 14761 Query 60269 TGCACCCAGTTGGTTAGAGTAGGAGAAGCTATCTTCTAGAATCTTCATCACAGGGATGAC 60328 ||||| ||||| |||| || || ||| ||| ||||| || ||||| || || || || Sbjct 14760 CGCACCTAGTTGATTAGCATAAGAAAAGGCATCCTCTAGCATTTTCATTACTGGAATAAC 14701 Query 60329 TCCAGA 60334 || || Sbjct 14700 CCCGGA 14695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 225721411211300