Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014 -05-08] 2,395 sequences; 374,774,708 total letters Query= NC_012635.1 Length=168394 Score E Sequences producing significant alignments: (Bits) Value seq477 84.2 2e-11 >seq477 Length=240241 Score = 84.2 bits (92), Expect = 2e-11 Identities = 172/249 (69%), Gaps = 9/249 (4%) Strand=Plus/Minus Query 142583 TGCAATATTAAATGGAAGACCGAGGAAAACATCTACCGAACGTTGATACCACTGA-AGGT 142641 |||||||||||| |||| ||| | |||||||| | |||||||||| | ||| | | Sbjct 223880 TGCAATATTAAAAGGAACACCTAAAAAAACATCAGCACTACGTTGATACAATTGACAACT 223821 Query 142642 CAAGGTATC--CATTACGCACATTAAACTGATAGAACATATGACAAGGCGGTAATGCCAT 142699 || ||| | || |||| ||| || || ||||||| ||||| || ||||| Sbjct 223820 TAATTTATTATCTTTTGAAACATAAAATTGCATTAAAGTATGACATGGCGGCAACGCCAT 223761 Query 142700 ATATTTAAGTTCAGCTGGATTCCACGCAGAAACAATTTGACGCCTATCATTTGG--CAGT 142757 | || || ||||||||||||||| ||| |||||| || || | || ||| ||| Sbjct 223760 TTTTTCAATTTCAGCTGGATTCCAAGCACTAACAATATGGCGACGTGAATATGGATTAGT 223701 Query 142758 TTTTTAATACGATC-AATAACTTCTATAATTTGATCTACACCGCCAAAATCACGCCACTG 142816 |||| ||| ||| || || | ||| ||||| ||||| ||||| || || || Sbjct 223700 TTTTAAAT--TATCTAACAAAATTGCTAA-CTGATCAACACCATTAAAATTTCGTCATTG 223644 Query 142817 TTTTCCATA 142825 ||| ||||| Sbjct 223643 TTTCCCATA 223635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 538716671686800