Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014 -05-08] 2,395 sequences; 374,774,708 total letters Query= NC_012740.1 Length=166418 Score E Sequences producing significant alignments: (Bits) Value seq477 116 4e-21 >seq477 Length=240241 Score = 116 bits (128), Expect = 4e-21 Identities = 166/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 140902 TTAACTGTTCCATAACTTGATCAAAATGGTTTTTGTAAATGTGGCAATCCCCACACTGAT 140961 |||||||||| ||||||| |||||||||||| ||||| |||||||| || | | Sbjct 224004 TTAACTGTTCATTAACTTGTGTAAAATGGTTTTTATAAATATGGCAATCTCCTAATGTGT 223945 Query 140962 AAACCAGTTCGCCAACTTCTAATCCGCAAATCTTCGCGATGATATGCGTTAACAGTGCAT 141021 |||| | || |||||||||||||| ||| | ||| || | ||| ||||||| | || Sbjct 223944 AAACAAAATCACCAACTTCTAATCCTGAAACTTGCGCAATTAAATGAGTTAACAACGAAT 223885 Query 141022 AGCTCGCTACGTTGAACGGATTCCCTAAAAAGAGATCATTCGAACGCATGA-AAAATAAA 141080 | || || | || || ||| |||||||| | |||| ||| ||| | ||| | Sbjct 223884 AACTTGCAATATTAAAAGGAACACCTAAAAAAACATCAGCACTACG-TTGATACAATTGA 223826 Query 141081 CAACTCAATTTGTTGTCGTTGGAAACATAAAACTGTACCATCGGATGACAT 141131 ||||| ||||| || || || ||||||||||| || | | | ||||||| Sbjct 223825 CAACTTAATTTATTATCTTTTGAAACATAAAATTGCATTAAAGTATGACAT 223775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 532393660987600