Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014 -05-08] 2,395 sequences; 374,774,708 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq37 98.7 1e-15 >seq37 Length=1463180 Score = 98.7 bits (108), Expect = 1e-15 Identities = 340/526 (65%), Gaps = 7/526 (1%) Strand=Plus/Minus Query 112305 GAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAG 112364 ||||| || || || || |||||||||||||| || ||||| | || ||||||||| || Sbjct 1100181 GAGACCGGGACTCCTTACATGCTTTACAAAGATGCTTGTAATCGTAAAAGTAATCAACAG 1100122 Query 112365 AATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAA 112424 ||| | || || || | ||| | |||||||||||| | |||| |||| Sbjct 1100121 AATGTTGGCACTATAAAATGCAGTAACTTGTGTACAGAAATCGTCGAATATACATCACCT 1100062 Query 112425 GATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAG 112484 || || | || || || || || || ||||| || | | || ||| ||| || Sbjct 1100061 GAAGAAATAGCAGTTTGCAATCTAGCCTCAATTGCGTTGAATATGTTCGTG--ACCACAG 1100004 Query 112485 ACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTA 112544 | ||| | || ||||| | | |||||| | |||||| | || | | |||| |||||| Sbjct 1100003 ATAAACA-ATATGATTTTCACAAACTCAAAGAAGTTGCCAAGCTTATAACAAGAAACCTC 1099945 Query 112545 AACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGA 112604 |||| | || ||| |||| || || | | | | || |||||| | | Sbjct 1099944 AACAAGATAATCGATGTCAATTACTATCCGCTGTCGGAAACCAGAAAGTCTAATTTTCGT 1099885 Query 112605 CACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCAC 112664 || |||||||||||| | ||||||||||| | || || | | | ||| | || | Sbjct 1099884 CATCGTCCAATTGGTTTAGGTGTCCAAGGATTTGCTGACGCACTAATTTTAATGCGTTAT 1099825 Query 112665 GCATTTGATTCCGACGAAGCGAAGGA--AATCAATGCGCGTATATTTGAGACAATGTATC 112722 | | ||| ||| ||| | | | | ||| | || ||||| ||||| ||| Sbjct 1099824 CCCTATGAAAGCGA--AAGTGCTGCACGCTTAAATAAACAAATTTTTGAAACAATATATT 1099767 Query 112723 ACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTG 112782 | | || | || || |||| || ||||| | | ||||| || ||||||| || Sbjct 1099766 ATGGTGCCTTAGAAGCTAGTTGTGAATTGGCCAAACAGTACGGTCCGTACGAAACCTATG 1099707 Query 112783 AGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGA 112828 | ||| ||| | | |||| | ||||||| |||||||||||| Sbjct 1099706 AAGGTAGTCCCGTTAGTAAAGGTATCCTTCAATATGATATGTGGGA 1099661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620723816524400