Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014 -05-08] 2,395 sequences; 374,774,708 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq477 127 5e-24 >seq477 Length=240241 Score = 127 bits (140), Expect = 5e-24 Identities = 201/285 (71%), Gaps = 5/285 (2%) Strand=Plus/Plus Query 133904 TTGAAAAATAATCCTGATTCTCGACGTCATATTCTAACTGCATGGAATGTTGGTGAACTA 133963 || |||| |||||| |||| || || |||||| | | ||| |||||| | |||| | Sbjct 223695 TTAAAAACTAATCCATATTCACGTCGCCATATTGTTAGTGCTTGGAATCCAGCTGAAATT 223754 Query 133964 GATAAAATGACTTTGCCACCATGTCATTGCTTTAGT-CAATTCTTCGT---AAATGACGG 134019 || |||||| | ||||| ||||||||| ||||| | ||||| | || ||| || Sbjct 223755 GAAAAAATGGCGTTGCCGCCATGTCATA-CTTTAATGCAATTTTATGTTTCAAAAGATAA 223813 Query 134020 TAAGTTATCATGTATTCTATATCAACGTAGCTGTGATCTATTCTTAGGAGTACCATTCAA 134079 ||| ||| ||| | ||||||||||| |||| | || ||||| || || || || Sbjct 223814 TAAATTAAGTTGTCAATTGTATCAACGTAGTGCTGATGTTTTTTTAGGTGTTCCTTTTAA 223873 Query 134080 CATTGCTTCATATTCATTACTAACTCATATGTTAGCACAAGTTTGTGGGTTAGAAGTTGG 134139 ||||| ||||| || |||||||| | | || ||||||| || ||||||||||| Sbjct 223874 TATTGCAAGTTATTCGTTGTTAACTCATTTAATTGCGCAAGTTTCAGGATTAGAAGTTGG 223933 Query 134140 TGAGTTTGTATGGATGGGTGGAGATGTTCACATTTATAAAAATCA 134184 ||| ||||| | | |||||| || ||||||||||| || Sbjct 223934 TGATTTTGTTTACACATTAGGAGATTGCCATATTTATAAAAACCA 223978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147555185112710