Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014 -05-08] 2,395 sequences; 374,774,708 total letters Query= NC_019515.1 Length=93839 Score E Sequences producing significant alignments: (Bits) Value seq477 125 4e-24 >seq477 Length=240241 Score = 125 bits (138), Expect = 4e-24 Identities = 201/288 (70%), Gaps = 3/288 (1%) Strand=Plus/Minus Query 78338 TCTTGT---CTGTTCCTGTACTTGCGGTATATGATTCTTGTAAATATGAGCGTCACCGAT 78394 |||||| |||||| | ||||| | | ||| || || |||||||| || || | Sbjct 224009 TCTTGTTAACTGTTCATTAACTTGTGTAAAATGGTTTTTATAAATATGGCAATCTCCTAA 223950 Query 78395 TGTGTGAATGAAGTCTCCTACTTCCAGTCCGCACAAATGCGCAATAATATGTGTAAGTAA 78454 ||||| || || || || ||||| | ||| | | |||||||| | ||| || | || Sbjct 223949 TGTGTAAACAAAATCACCAACTTCTAATCCTGAAACTTGCGCAATTAAATGAGTTAACAA 223890 Query 78455 TGCGTATGAAGCAATGTTAAATGGAATTCCTAAGAATACGTCACCGCTTCGTTGGTACAA 78514 | || ||||| ||||| |||| ||||| || || ||| | || ||||| ||||| Sbjct 223889 CGAATAACTTGCAATATTAAAAGGAACACCTAAAAAAACATCAGCACTACGTTGATACAA 223830 Query 78515 TTGGCAACTTAGCTTTCCATCAACTGATACGTAAAACTGGAATAGAGTGTGACAAGGCGG 78574 ||| ||||||| || ||| ||| || ||||| || | || ||| ||||| ||||| Sbjct 223829 TTGACAACTTAATTTATTATCTTTTGAAACATAAAATTGCATTAAAGTATGACATGGCGG 223770 Query 78575 TAGTGCCATATCATCTAAGTCAGCAGGATTCCAAGCAGACACAATATG 78622 | ||||| | || | ||||| |||||||||||| |||||||| Sbjct 223769 CAACGCCATTTTTTCAATTTCAGCTGGATTCCAAGCACTAACAATATG 223722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300151238611000