Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014 -05-08] 2,395 sequences; 374,774,708 total letters Query= NC_019526.1 Length=345809 Score E Sequences producing significant alignments: (Bits) Value seq477 113 1e-19 >seq477 Length=240241 Score = 113 bits (124), Expect = 1e-19 Identities = 216/315 (69%), Gaps = 5/315 (2%) Strand=Plus/Plus Query 38245 TAAAAAATGATCCATATGGACGTCGACATATTCTAAGTGCATGGAATGTTGGTGAGCTTG 38304 |||||| | |||||||| |||||| |||||| | ||||| |||||| | ||| ||| Sbjct 223696 TAAAAACTAATCCATATTCACGTCGCCATATTGTTAGTGCTTGGAATCCAGCTGAAATTG 223755 Query 38305 ATGATATGGCTCTTCAACCATGTCATAGTTTTGTTCAATGGGTAGTT---AGTGATAATA 38361 | | ||||| | | |||||||||| ||| | |||| ||| | ||||||| Sbjct 223756 AAAAAATGGCGTTGCCGCCATGTCATACTTTAATGCAATTTTATGTTTCAAAAGATAATA 223815 Query 38362 AACTAAGTTGT-ATTCTTACCCAACGCTCAGCAGATACATTCTTGGGAGTTCCACTGAAT 38420 || |||||||| | | || | |||| || ||| || || || ||||| | ||| Sbjct 223816 AATTAAGTTGTCAATTGTATC-AACGTAGTGCTGATGTTTTTTTAGGTGTTCCTTTTAAT 223874 Query 38421 ATCACATCATATTCAGTACTCACTCATATGATAGCACAAATTACTGGATTAGAAGTTGGT 38480 || || ||||| | | |||||| | || || ||| || | ||||||||||||||| Sbjct 223875 ATTGCAAGTTATTCGTTGTTAACTCATTTAATTGCGCAAGTTTCAGGATTAGAAGTTGGT 223934 Query 38481 GAATTTATCTGGAACGGTGGAGATTGTCATATTTACTTGAATCATATCGAACAAGTAAAA 38540 || ||| | | | |||||||| |||||||| || ||| | |||||| || Sbjct 223935 GATTTTGTTTACACATTAGGAGATTGCCATATTTATAAAAACCATTTTACACAAGTTAAT 223994 Query 38541 GAACAATTATCACGA 38555 ||||| ||| || || Sbjct 223995 GAACAGTTAACAAGA 224009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1106423647311240