Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014 -05-08] 2,395 sequences; 374,774,708 total letters Query= NC_019909.1 Length=168809 Score E Sequences producing significant alignments: (Bits) Value seq1188 105 7e-18 seq1064 105 7e-18 seq1093 86.0 7e-12 >seq1188 Length=10746 Score = 105 bits (116), Expect = 7e-18 Identities = 74/82 (90%), Gaps = 3/82 (4%) Strand=Plus/Minus Query 74898 AATTTGGTGGCCCTTACTGGATTTGAACCAGTGACCAATCGATTATGAGTCGACTGCTCT 74957 ||||| |||||||| ||||||||||||||| |||||| ||||||||||||| ||||||| Sbjct 9313 AATTT--TGGCCCTTGCTGGATTTGAACCAGCGACCAAGCGATTATGAGTCGCCTGCTCT 9256 Query 74958 AACCATCTGAGCTAAAGGGCCT 74979 ||| ||||||||||||||||| Sbjct 9255 TACC-TCTGAGCTAAAGGGCCT 9235 >seq1064 Length=27237 Score = 105 bits (116), Expect = 7e-18 Identities = 74/82 (90%), Gaps = 3/82 (4%) Strand=Plus/Minus Query 74898 AATTTGGTGGCCCTTACTGGATTTGAACCAGTGACCAATCGATTATGAGTCGACTGCTCT 74957 ||||| |||||||| ||||||||||||||| |||||| ||||||||||||| ||||||| Sbjct 26814 AATTT--TGGCCCTTGCTGGATTTGAACCAGCGACCAAGCGATTATGAGTCGCCTGCTCT 26757 Query 74958 AACCATCTGAGCTAAAGGGCCT 74979 ||| ||||||||||||||||| Sbjct 26756 TACC-TCTGAGCTAAAGGGCCT 26736 >seq1093 Length=23860 Score = 86.0 bits (94), Expect = 7e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 74902 TGGTGGCCCTTACTGGATTTGAACCAGTGACCAATCGATTATGAGTCGACTGCTCTAACC 74961 |||||| || ||||||| ||||||||||||||| || ||||||| || |||||||||| Sbjct 8628 TGGTGGACCCTACTGGACTTGAACCAGTGACCATCCGGTTATGAGCCGGATGCTCTAACC 8687 Query 74962 ATCTGAGCTAAAGGGCC 74978 | ||||||||| || || Sbjct 8688 AACTGAGCTAAGGGTCC 8704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 540044631929800