Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014 -05-08] 2,395 sequences; 374,774,708 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq49 122 1e-22 >seq49 Length=1174911 Score = 122 bits (134), Expect = 1e-22 Identities = 346/517 (67%), Gaps = 16/517 (3%) Strand=Plus/Minus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 || |||||||| || | ||| || || || || || || ||||| || ||||||||||| Sbjct 167499 ACTCCAATAGGTCCCATGCCCGGGCCGCCGCCGCCGTGAGGAATGCAAAATGTCTTATGC 167440 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 ||||||| |||| | || || ||||| || | || || ||| || ||||| Sbjct 167439 AAATTTAAATGAGAAACGTCACTTCCATAATCGCCAGGACGACATAAACCCACTTGTGCG 167380 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | ||| || ||||| ||||| || || || |||| | ||| | | | || | Sbjct 167379 TTCATATTGGCGCCATCCAGATACACTTGGCCTCCATGGCGATGTATAAGGTCGCAAA-- 167322 Query 138363 TGTCTGATGTTTGT---TTCAAATACACCATGAGTCGATGGATATGTAATCATAATACAT 138419 |||| | | |||| ||| || || || ||| || || ||||||| ||| | |||| Sbjct 167321 TGTCCG-TAATTGTCTCTTCGAAAACGCCCATAGTTGAAGGGTATGTAACCATTACACAT 167263 Query 138420 GAGAGTTCAAATG--TATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGC 138477 || || | | || | |||| || |||||| | |||| | ||||||||| | | Sbjct 167262 GAAAGATTACTTGCATGTTCA-GA-TGCTTTATCGCGCAGATGTGCCATGTCTATGCTTC 167205 Query 138478 CATCA-TCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGA 138536 ||||| | | || | | | | |||||||||| || ||||| ||| ||||||| Sbjct 167204 CATCAGAAAGTATACGT-ATAGGTTCAACTTTCATGCCGGCCATTTGAGCAGAAGCAGGA 167146 Query 138537 TTAGTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATCATC-TCCTGATCC 138595 || || |||||||| || || || ||||| ||||||| | | || | ||| | Sbjct 167145 TTTGTACCATGTGCAGAAATGGGAATTAGACAAACATTTCGGTGCCCTTCTTTACGATGC 167086 Query 138596 TTGATGATATGCT-TGGATTGCTAACAGTCCTGCATACTCACCCTGTGATCCTGCGTTAG 138654 | | || || ||| | || || || || ||||| || || || | || | || | Sbjct 167085 TCG-TGGTA-GCTGCGTATGGCCCGTAGGCCCGCATATTCGCCTTGAGCACCAGAATTGG 167028 Query 138655 GTTGTAATGATATAGAATCAAAACCTGTGATATCACA 138691 |||| || ||||| |||| |||||||||| ||||| Sbjct 167027 GTTGAAACGATATTTTATCATAACCTGTGATTTCACA 166991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578981066235400